Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F21
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74475-4|CAD01086.1| 185|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AF067940-4|AAC19201.1| 487|Caenorhabditis elegans Hypothetical ... 36 0.034
Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 30 2.3
Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 28 6.9
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 28 6.9
AF045639-6|AAX22296.1| 392|Caenorhabditis elegans Serpentine re... 28 6.9
Z81500-1|CAB04093.1| 390|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical pr... 28 9.1
U41995-2|AAA83460.1| 317|Caenorhabditis elegans Serpentine rece... 28 9.1
AF386744-1|AAL57289.1| 384|Caenorhabditis elegans PAF-1 protein. 28 9.1
AF039716-8|AAB96738.1| 384|Caenorhabditis elegans Paf-acetylhyd... 28 9.1
>Z74475-4|CAD01086.1| 185|Caenorhabditis elegans Hypothetical
protein R04F11.5 protein.
Length = 185
Score = 62.5 bits (145), Expect = 3e-10
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Frame = +3
Query: 240 DYWKNLFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNPTECDFKDNLKIINN 419
+Y+K + DY + ++ +D P+KA +G+ + NPTE + D L
Sbjct: 19 EYFKRMGNDYATVARETVQGCKDRPVKAGVVFSGLGFLTYAYQTNPTELEMYDYLCERRQ 78
Query: 420 EVGLVSEECLNPKAVEHLRFLDTCYNQEVIHYRSLGILSVMYTSELSNSCDLYRAHCTYT 599
++ LV NP + L D +Q +HY +L S++ S+ ++ +Y + +
Sbjct: 79 KLVLVPNSEHNPATTKELTARDFLISQNRLHYYNLWFFSLLVASDYNDKLRIYSSQDSNL 138
Query: 600 KP-TYFSFPSRIVDIGFMGKWWNLFIKSTNYDVN 698
K + IVDIG +G+W + +YDVN
Sbjct: 139 KDWPWTELWRNIVDIGALGRWHRMETAFVDYDVN 172
>AF067940-4|AAC19201.1| 487|Caenorhabditis elegans Hypothetical
protein F36F12.2 protein.
Length = 487
Score = 35.9 bits (79), Expect = 0.034
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 453 PKAVEHLRFLDTCYNQEVIHYRSLGILSVMYTSELSNSCDLYRAH---CTYTKPTYFSFP 623
PK + + CYNQ H R G+LS T + C+L + CT++ TY S P
Sbjct: 405 PKDDFYTNIVFQCYNQSFYHIRDAGLLSAESTCVNAFDCELSQREAMPCTHSDATYHSGP 464
>Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 453 PKAVEHLRFLDTCY--NQEVIHYRSLGILSVMYTSELSNSCDLYRAHC 590
P A+ +L F T ++EVIH+ L +LSV+ + E L RA C
Sbjct: 328 PTALFYLLFSPTTIQDDEEVIHWHRLSLLSVVTSEEAEELKPLSRAMC 375
>Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 453 PKAVEHLRFLDTCY--NQEVIHYRSLGILSVMYTSELSNSCDLYRAHC 590
P A+ +L F T ++EVIH+ L +LSV+ + E L RA C
Sbjct: 328 PTALFYLLFSPTTIQDDEEVIHWHRLSLLSVVTSEEAEELKPLSRAMC 375
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 344 DASCPLHGFHWIILYITP 291
DAS P+HGF+W+ Y P
Sbjct: 249 DASSPIHGFNWVASYNRP 266
>Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical
protein C29F3.6 protein.
Length = 278
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = -1
Query: 195 SLWCLYF*PFPTLY--KYFVTFLWSLFITKKYQMSSXTFYFILCKYLCSAQFILFLII 28
S+WC F + T++ KY F++++++ + + S F+ +LC+ +A ILF II
Sbjct: 108 SVWCPIF--YKTMFNLKYTKLFIFAVWLIS-FLIGSL-FHIVLCRIRFNADLILFTII 161
>Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.10 protein.
Length = 283
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -3
Query: 241 SAHFSIIVPLNFSGNFTLVLIFLTVPDTL*ILRNIFVVFIYYEEIPNVI 95
+ HFS+++P GN VL L + + + IY +++PN +
Sbjct: 79 NVHFSLVIPAASIGNMRSVLTLLIALERVIAIYFPIFFHIYRQKLPNFV 127
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 164 RHFINTS*HFCGLYLLRRNTKCHPTHFIL 78
RH + +FC LYLLR + PT F L
Sbjct: 5 RHHLGGLLYFCALYLLRASQAQPPTFFAL 33
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 164 RHFINTS*HFCGLYLLRRNTKCHPTHFIL 78
RH + +FC LYLLR + PT F L
Sbjct: 5 RHHLGGLLYFCALYLLRASQAQPPTFFAL 33
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 164 RHFINTS*HFCGLYLLRRNTKCHPTHFIL 78
RH + +FC LYLLR + PT F L
Sbjct: 5 RHHLGGLLYFCALYLLRASQAQPPTFFAL 33
>AF045639-6|AAX22296.1| 392|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 5 protein.
Length = 392
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 180 YF*PFPTLYKYFVTFLWSLFITKKYQMSSXTFYFILCKY-LCSAQFILF 37
YF PFP + + F T + T K + S IL + + SAQF +F
Sbjct: 120 YFAPFPVIERCFATLYMHDYETNKRRWISYLLSTILYIFAITSAQFFIF 168
>Z81500-1|CAB04093.1| 390|Caenorhabditis elegans Hypothetical
protein F11D11.1 protein.
Length = 390
Score = 27.9 bits (59), Expect = 9.1
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Frame = +3
Query: 231 KWADYWKNLFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNP--TECDFKDNL 404
KW +K Y + R +D P KWT G Y NN TE DN
Sbjct: 193 KWVQEYKISNKTYPAWIGGARDCPEDSPCTIFKWTDGYTNLYDALNNNAQLTERTGFDNC 252
Query: 405 KII-----NNEVGLVSEECLNPKAVEHLRFL 482
I N + + S+ C+ P+A R +
Sbjct: 253 LAILPPRNNTDAIIFSQPCV-PEAYCQFRMI 282
>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical protein
B0024.8 protein.
Length = 1185
Score = 27.9 bits (59), Expect = 9.1
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Frame = +3
Query: 393 KDNLKIINNEVGLVSEECLNPKAVEHLRFLDTCYNQEVIHYRSLGILSVMYT----SELS 560
+ NLK + N++ L+ K+ EH TC + + +L M + S +
Sbjct: 1040 ESNLKAVMNQLAHALTAHLSSKSEEHKHLARTCIQHTIRSIEPVSLLPAMTSATKKSNVK 1099
Query: 561 NSCDLYRAHCTYTKPTYFSFPSRIVDIGFMGKWWNLFIKSTNYDVN 698
+ +C +K Y S P + V++ + W+ +K++ DV+
Sbjct: 1100 QRPFILTQYCELSKLAYKSKPKQ-VEVMALPLLWD-SVKNSAPDVD 1143
>Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical
protein M03C11.2 protein.
Length = 848
Score = 27.9 bits (59), Expect = 9.1
Identities = 27/97 (27%), Positives = 42/97 (43%)
Frame = +3
Query: 198 FPEKFKGTIIEKWADYWKNLFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNP 377
F +K K I K + K +F + RQ SD+ D +A K + G I F ++
Sbjct: 674 FQKKMKEFGILKRIEEKKAVFTESRQPT----SDVWDRFSRAAKTSKGAILFAVVGGKMS 729
Query: 378 TECDFKDNLKIINNEVGLVSEECLNPKAVEHLRFLDT 488
+F D L +GL + + E ++FLDT
Sbjct: 730 EGINFCDELGRAVIVIGLPYPNKTSVELRERMKFLDT 766
>U41995-2|AAA83460.1| 317|Caenorhabditis elegans Serpentine
receptor, class x protein46 protein.
Length = 317
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 141 TFLWSLFITKKYQMSSXTFYFILCKYLCSAQFILFLI 31
T +W Q S +FY I CKY+ S FI+ LI
Sbjct: 149 TEMWMFLYHVSNQCVSFSFYAIFCKYI-SIIFIIVLI 184
>AF386744-1|AAL57289.1| 384|Caenorhabditis elegans PAF-1 protein.
Length = 384
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 393 KDNLKIINNEVGLVSEECLNPKAVEHLRFLDT 488
KD KI N +VG +EEC KAV+ L LD+
Sbjct: 174 KDQFKIRNEQVGKRAEEC--AKAVKILEQLDS 203
>AF039716-8|AAB96738.1| 384|Caenorhabditis elegans
Paf-acetylhydrolase protein 1 protein.
Length = 384
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 393 KDNLKIINNEVGLVSEECLNPKAVEHLRFLDT 488
KD KI N +VG +EEC KAV+ L LD+
Sbjct: 174 KDQFKIRNEQVGKRAEEC--AKAVKILEQLDS 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,324,094
Number of Sequences: 27780
Number of extensions: 438228
Number of successful extensions: 1050
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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