Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_F16
         (845 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0445 + 25280642-25281796                                         32   0.66 
10_01_0132 - 1601421-1601657,1601761-1601922,1602812-1603721,160...    29   3.5  
07_03_1706 + 28855669-28855801,28856013-28856044,28856158-288562...    29   4.7  
04_04_0667 + 27097741-27098085,27098203-27098547                       28   8.1  

>04_04_0445 + 25280642-25281796
          Length = 384

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 687 IPARTFLAFAVTLXEHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAV 830
           +P  T++  A    EH + +N   +S  AAD T +  V++  P L+A+
Sbjct: 221 VPILTYMCNAAHFVEHAVCNNASSSSSGAADATAAAPVIVTDPRLDAL 268


>10_01_0132 -
           1601421-1601657,1601761-1601922,1602812-1603721,
           1604587-1604651,1604704-1604746,1605086-1605128,
           1605874-1605955,1606270-1606464,1606567-1606721,
           1611207-1611435,1611538-1611693,1612539-1613476,
           1614946-1614967
          Length = 1078

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 787 CVTSAAWRELWKGLSRI 737
           CV S  WR+LW+ L+RI
Sbjct: 705 CVLSRRWRDLWRSLTRI 721


>07_03_1706 +
           28855669-28855801,28856013-28856044,28856158-28856229,
           28856631-28856727,28857195-28857256,28857726-28858024,
           28858306-28858663,28858692-28859297,28859500-28859698,
           28860039-28860101,28860603-28860673
          Length = 663

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -1

Query: 212 RANPQPTGRSRTKALSLGAHAHF 144
           R+  QP G++R + LSL +H+HF
Sbjct: 437 RSTEQPAGKTRMEYLSLFSHSHF 459


>04_04_0667 + 27097741-27098085,27098203-27098547
          Length = 229

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = +3

Query: 348 KQQELDLPSLQVEETSERGAKKKEKPRHGGPATTMSQIS 464
           KQ++L L ++Q+ E  ER  +++E+  +GG ATT +  S
Sbjct: 106 KQEKLAL-TVQLHELRERLREREERSGNGGAATTAASSS 143


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,234,711
Number of Sequences: 37544
Number of extensions: 454178
Number of successful extensions: 1441
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)