Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_F16
         (845 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   6.7  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   8.8  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   8.8  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   8.8  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   8.8  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -2

Query: 841 SGVKTAL--SAGVFNSTFVDCVTSAAWRELWK 752
           + VK A+    GVF + + DC+ +  +   WK
Sbjct: 439 AAVKAAILEHTGVFTALYQDCLVNGTFPAAWK 470


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 561 EGRALPHAVFQLHTSAR 511
           EG ALPHA+ +L  + R
Sbjct: 168 EGYALPHAILRLDLAGR 184


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 561 EGRALPHAVFQLHTSAR 511
           EG ALPHA+ +L  + R
Sbjct: 168 EGYALPHAILRLDLAGR 184


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 561 EGRALPHAVFQLHTSAR 511
           EG ALPHA+ +L  + R
Sbjct: 168 EGYALPHAILRLDLAGR 184


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -2

Query: 241 NISIEFVNVAARIRNQR-AGPE 179
           N+S+E +  A R+R Q   GPE
Sbjct: 291 NVSVEVIKEAIRVRQQELRGPE 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,620
Number of Sequences: 2352
Number of extensions: 16490
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)