Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_F16
         (845 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    25   1.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   4.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   8.2  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 363 QAPVVCPKMWSRYTRRSGCRTCWTLRSGSAPCSAS 259
           + P  CP+   R+TR    +T   L +G  P   S
Sbjct: 7   EKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCS 41


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 776 GSVERVVERIVSNIVLL*GNC 714
           G V R+  RI  N VLL G C
Sbjct: 31  GCVSRISNRISRNRVLLRGQC 51


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 327 ICSTFLDKQQELDLPSLQVEETSERGAKKKE 419
           IC +  ++Q+  D    ++EE S +G+K KE
Sbjct: 427 ICGSISEEQKFDDEAHWELEEESLQGSKIKE 457


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 432 GGPATTMSQISGVKRTLTHTNSFT 503
           G PATT++ I+    T T T + T
Sbjct: 652 GAPATTITTITTTTTTTTTTTTTT 675


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -2

Query: 535 VSTPYLGTRSPVKLFVCVKVLLTPDIC 455
           ++ PY  T+S +  F    +L+  ++C
Sbjct: 138 MAIPYAVTKSAMFFFAATSLLVVAEVC 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,579
Number of Sequences: 438
Number of extensions: 4267
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)