Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F14
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 37 0.020
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 35 0.060
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 35 0.060
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 35 0.060
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 35 0.060
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 34 0.10
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 33 0.18
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 31 0.74
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.7
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 30 2.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.0
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 3.0
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.0
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.0
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.0
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 5.2
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 29 5.2
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 6.9
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 6.9
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 6.9
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 6.9
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 6.9
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 6.9
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 6.9
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 6.9
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 9.1
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 28 9.1
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 9.1
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 36.7 bits (81), Expect = 0.020
Identities = 37/145 (25%), Positives = 52/145 (35%)
Frame = +3
Query: 294 SNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 473
+++ PA EA D A ++ A A SS +P+ A E
Sbjct: 504 ASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSS-VPEETPAPAPAADET 562
Query: 474 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAV 653
PA P +T A AE + P+A + +A +A P D P + A A
Sbjct: 563 PAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAPAPAADETP---APAPAA 619
Query: 654 PEIKTPEAADAPKLADNPVXEDKPA 728
E P A A P E+ PA
Sbjct: 620 EETPAPAPAVEETPAPAPAVEETPA 644
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/99 (26%), Positives = 35/99 (35%)
Frame = +3
Query: 432 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 611
P E A E P + E A VAE + P+A + A +A P
Sbjct: 637 PAVEETPAPAPAAEETPAPAPAAAEYAAPVAEETPAPAPAAEETPAPAQAAEETPAPAPA 696
Query: 612 IDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVXEDKPA 728
+ P + AA P A +AP A P + PA
Sbjct: 697 AEETP-ASAPAAEETPAPAPAAEEAP--APAPAAPETPA 732
Score = 29.1 bits (62), Expect = 3.9
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Frame = +3
Query: 432 PDAEAKSAD--IKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAAIIPN 599
P AE A + AA DS AT S E +A TD+ SAD+ A + +
Sbjct: 289 PTAEETPAPETVSAAPEAANSYDSAGGDAATAPAPSSEAADAAAPTDSAASADTTAALVD 348
Query: 600 MVKKIDLAPNVXSDAAAVPEIKTPEAADAP-KLADNPVXEDKPADI 734
A + + A + +T A P +AD D P+ I
Sbjct: 349 TSSSEHAAESTEAPATDIAATETTPAPSVPAPVADAAAGYDSPSSI 394
Score = 27.9 bits (59), Expect = 9.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAA 587
A+++E A A +A+ E PA+ P +T A AE + P+A T A + +AA
Sbjct: 684 AQAAEETPAPAPAAE---ETPASAPAAEETPAPAPAAEEAPAPAPAAPETPAPAAEGAAA 740
Query: 588 IIPNMVKKIDLAPNVXSDAAAVPEIKTPEAADA 686
P + D A + + A+ + +A+ A
Sbjct: 741 PAPIVSSGYDAAQSTDTVVASSAPATSSDASGA 773
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 35.1 bits (77), Expect = 0.060
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 50 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 108
Query: 594 PNMVKKIDL--APNVX--SDAAAVPEIKTPEAADAPKLA 698
P + D P+ SDA+A + PEA +AP++A
Sbjct: 109 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 147
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 35.1 bits (77), Expect = 0.060
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 594 PNMVKKIDL--APNVX--SDAAAVPEIKTPEAADAPKLA 698
P + D P+ SDA+A + PEA +AP++A
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 35.1 bits (77), Expect = 0.060
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 594 PNMVKKIDL--APNVX--SDAAAVPEIKTPEAADAPKLA 698
P + D P+ SDA+A + PEA +AP++A
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 35.1 bits (77), Expect = 0.060
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 594 PNMVKKIDL--APNVX--SDAAAVPEIKTPEAADAPKLA 698
P + D P+ SDA+A + PEA +AP++A
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIA 184
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 34.3 bits (75), Expect = 0.10
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 581
KS E P E K ++ V +EPAA E+ K + V E KEE P++ +E D
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDE 183
Query: 582 AAIIPNMVKKIDLAPNVXSDAAAVPEIKTPEAADAP 689
+ K AP ++ A E K E AP
Sbjct: 184 PVVNTEEKKDAAEAPAADEESEAAEE-KVAETTVAP 218
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 33.5 bits (73), Expect = 0.18
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +3
Query: 447 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 623
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 624 PNVXSDAAAVPEIKTPEAADAPKLADNPVXE-DKPAD 731
P AA V + +A+ AP V E +K AD
Sbjct: 125 P-----AAPVAPPQLTQASPAPVAPAVLVPEKEKTAD 156
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 31.5 bits (68), Expect = 0.74
Identities = 29/106 (27%), Positives = 37/106 (34%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 593
AK P E+ + PA +P D + A A K + + G ADS
Sbjct: 549 AKKDPAPAKESLKPKADTKAPA-KPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKE 607
Query: 594 PNMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVXEDKPAD 731
P K D +P AVP P+ AP P KP D
Sbjct: 608 PEKSKPRDPSPK-----KAVPAKPVPKTEVAPAAVKKPEPISKPKD 648
Score = 27.9 bits (59), Expect = 9.1
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Frame = +3
Query: 432 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAI------I 593
P+ AKS D ++ A+P +S V K+ KP D + A+ +
Sbjct: 761 PEPVAKSRDPSPKKAKAEP-NSPVVPPTPVKNPVKKWKPPWEDDDAPAEPVNVPEPEKKT 819
Query: 594 PNMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLA-DNPVXEDKPAD 731
P + KK + P S AVP K DAP ++ P KP +
Sbjct: 820 PVLAKKTPVKPRDPSPKKAVP-AKPSTKTDAPPVSVKKPEPVSKPKE 865
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 465 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 611
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 606 KKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVXEDKPADI 734
KK D P+ VP TP+ A P P ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 596
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 597 NMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNP 707
+ KK + +P+ + P T + D K P
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPP 1464
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 414 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 575
A+ E +A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 21 AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 596
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 597 NMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNP 707
+ KK + +P+ + P T + D K P
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPP 1464
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 596
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 597 NMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNP 707
+ KK + +P+ + P T + D K P
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPP 1464
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 596
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 597 NMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNP 707
+ KK + +P+ + P T + D K P
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPP 1464
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 540 EKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAVPEIKTPEAADAPK 692
EKP++ +AE D + K ++L V A PE PEA+ K
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYK 330
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.9
Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 7/137 (5%)
Frame = +3
Query: 300 DEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPA 479
+ PA+ E KD+ AP + + A A+SA VEE A
Sbjct: 576 ESAPALAEEHKDEAAPSE------------PVQDVPVEEVIEAVHIAPAESAPASVEE-A 622
Query: 480 AQPEDSKTEVQ----ATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAA 647
A E ++ V+ AT A S E+P A +A+S P K + +P
Sbjct: 623 APSESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEEHKDEASPTALESVE 682
Query: 648 AVPE---IKTPEAADAP 689
V E + + E+A AP
Sbjct: 683 DVIEAVHVASTESAPAP 699
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/101 (23%), Positives = 42/101 (41%)
Frame = +3
Query: 420 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 599
S + P AKS D + ++ E+ + + + + SK K +A+D + + A +
Sbjct: 185 SKKSPKKSAKSKD----DDSSDEEEEEEVKEKSPKKSSKSTKRAASDDDEEEEPVATKKS 240
Query: 600 MVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVXEDK 722
K P D +KTP+ K A+ P ED+
Sbjct: 241 KKSKRAETPEEEDDEEE-EVVKTPKKTKKSKRAETPEEEDE 280
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 483 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 626
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 444 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 621 APNVXSDAAAVPEIKTPEAA 680
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 483 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 626
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +3
Query: 456 DIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVX 635
DIK + A + ++ +T+ + + +E K + D+ P K N+
Sbjct: 235 DIKAFQ-AEKSKEIETKKNEEMEKKQEEPKVKPVPPGTTPDTTTTTPEKKSKSITDSNIK 293
Query: 636 SDAAAVPEIKTPEAADAPKL 695
+ +PE +TPEA P +
Sbjct: 294 PELDEIPEARTPEAEGPPMM 313
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 444 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 621 APNVXSDAAAVPEIKTPEAA 680
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 621 APNVXSDAAAVPEIKTP 671
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 621 APNVXSDAAAVPEIKTP 671
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 621 APNVXSDAAAVPEIKTP 671
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 441 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 620
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 621 APNVXSDAAAVPEIKTP 671
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +3
Query: 417 KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 572
K SEIPD + +KV E+P + PE+S+ E ++K++K + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925
Query: 573 ADSAAIIPNMVKK 611
D + II KK
Sbjct: 2926 NDGSEIIKMSKKK 2938
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 147 VSLAMPVAEEKDVVPAQPIL 206
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 147 VSLAMPVAEEKDVVPAQPIL 206
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 147 VSLAMPVAEEKDVVPAQPIL 206
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 147 VSLAMPVAEEKDVVPAQPIL 206
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 426 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 566
E + E + + K+EEPAA+ E+ + E + E EE+ + E
Sbjct: 347 EPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEEEEEEE 393
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 534 KEEKPSATDAEGSADSAAIIPNMVKKI-DLAPNVXSDAAAVPEIKTPEAADAPKLADNPV 710
+ E+ S +EG++ +I P KKI D+AP D + + + ++ P +A+ P
Sbjct: 188 RRERQSPVYSEGTSSEKSISPPPAKKIKDMAP-ALPDYSVISKPNLLQSLIFPMIAEQPS 246
Query: 711 XEDKP 725
P
Sbjct: 247 TSQSP 251
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 433 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 534
P L N+LI WK + K ++ KY + LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,975,799
Number of Sequences: 27780
Number of extensions: 211905
Number of successful extensions: 838
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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