Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_F13
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    25   0.91 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    25   0.91 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    25   0.91 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    25   0.91 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    25   0.91 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.9  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   6.4  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 479 PSRQIPTVLLIPAVKQYWYFPLRQ 408
           P+RQI   L +P  + +WY P  Q
Sbjct: 262 PARQI--ALTVPRYQAWWYLPFAQ 283


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 479 PSRQIPTVLLIPAVKQYWYFPLRQ 408
           P+RQI   L +P  + +WY P  Q
Sbjct: 262 PARQI--ALTVPRYQAWWYLPFAQ 283


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 479 PSRQIPTVLLIPAVKQYWYFPLRQ 408
           P+RQI   L +P  + +WY P  Q
Sbjct: 262 PARQI--ALTVPRYQAWWYLPFAQ 283


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 479 PSRQIPTVLLIPAVKQYWYFPLRQ 408
           P+RQI   L +P  + +WY P  Q
Sbjct: 262 PARQI--ALTVPRYQAWWYLPFAQ 283


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 479 PSRQIPTVLLIPAVKQYWYFPLRQ 408
           P+RQI   L +P  + +WY P  Q
Sbjct: 262 PARQI--ALTVPRYQAWWYLPFAQ 283


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 553 GGLCEPYSCVAHGYDRASPLLVGEKILIVGAGIIGNLW 666
           GG+C+PY+     YD    +  G + L++G  +   LW
Sbjct: 478 GGVCDPYTPWHTFYDYRPWVQHGHQELVLGGEVC--LW 513


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = +3

Query: 267 VSGFQRAPPTAWSRIQWHHYGCWEEVCLQERSEGRRGSEQSLQ 395
           V GF R        + W++  CW+  C +  S  +    + +Q
Sbjct: 740 VVGFLRRHNFKGLHLDWNYPVCWQSNCKKGASSDKPNFTKLIQ 782


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 408 EITEAAGSVRIHDDLLTVPEDRL 340
           ++TE A ++ I+DDL    +DR+
Sbjct: 135 DLTEGAKNMTINDDLEKREKDRM 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,205
Number of Sequences: 336
Number of extensions: 4192
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)