Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F13
(788 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 104 2e-23
SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharo... 71 3e-13
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 61 2e-10
SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase... 56 8e-09
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 52 7e-08
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 29 0.57
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 29 1.0
SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces ... 29 1.0
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 27 2.3
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 5.4
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 26 5.4
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 26 7.1
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 9.4
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 104 bits (249), Expect = 2e-23
Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Frame = +1
Query: 175 PLPKLXNXXXVIVKVEYSGICGTDLHIVQ----GEFPASKERPLPLGHEFSGTITDVGKK 342
P L + V V ++ +GICG+D+H + G+F K P+ LGHE +G + +VGK
Sbjct: 22 PGQTLTDDHQVKVAIKATGICGSDVHYWKEGGIGDFILKK--PMILGHESAGVVVEVGKG 79
Query: 343 -SVFRNGQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQV 519
S + G V V+P C LCD+CR G+Y C +T DG Y +D
Sbjct: 80 VSSLKPGDPVAVEPGCVCRLCDYCRSGRYNLCPHMEFAATPPY--DGTLRTYYITTEDFC 137
Query: 520 YLLPDGVSTEQGGLCEPYSCVAHGYDRASPLLVGEKILIVGAGIIGNLWVTSLHQLGHRD 699
LP +S E+G L EP S H R + L G ++L++G G +G L + G D
Sbjct: 138 TKLPKQISVEEGALFEPMSVAVHAMTRGN-LKCGSRVLVMGCGTVGLLMMAVAKAYGAID 196
Query: 700 VTVSXMNKVRLEIVNKLXTGYRLVTP 777
+ + R+E K G + TP
Sbjct: 197 IVAVDASPSRVEFAQK-YVGAKPFTP 221
>SPCC13B11.01 |adh1|adh|alcohol dehydrogenase
Adh1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 350
Score = 70.5 bits (165), Expect = 3e-13
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Frame = +1
Query: 205 VIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGK-KSVFRNGQKVVVD- 378
V+V ++Y+G+C TDLH +QG++P + PL GHE +G + VG + + G +V V
Sbjct: 36 VLVNIKYTGVCHTDLHALQGDWPLPAKMPLIGGHEGAGVVVKVGAGVTRLKIGDRVGVKW 95
Query: 379 PNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQVYLLPDGVSTEQGG 558
N +C C++C K + C ++ G DG + Y ++P+ V E
Sbjct: 96 MNSSCGNCEYCMKAEETICPHIQLS---GYTVDGTFQHYCIANATHATIIPESVPLEVAA 152
Query: 559 --LCEPYSCVAHGYDRASPLLVGEKILIVGA-GIIGNLWVTSLHQLGHRDVTV 708
+C +C + + S + GE I I GA G +G+L V + R V +
Sbjct: 153 PIMCAGITC--YRALKESKVGPGEWICIPGAGGGLGHLAVQYAKAMAMRVVAI 203
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 61.3 bits (142), Expect = 2e-10
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Frame = +1
Query: 118 MXAVVFXGKTLXLKXAHKYPLPKLXNXXXVIVKVEYSGIC-GTDLHIVQGEFPASKERPL 294
M A V+ G L +K A + P P + + VIVK IC G+D HI GE P ++ +
Sbjct: 37 MKACVWDGP-LNVKIA-EVPKPTITHPKDVIVKTTACTICSGSDSHIFSGEMPGIEKGAI 94
Query: 295 PLGHEFSGTITDVGKK-SVFRNGQKVVVDPNRACSLCDFCRKGKYQYCLTAG------IN 453
LGHE G + + G + + G +VV+ + AC C FC++ +Y C T +N
Sbjct: 95 -LGHESCGIVAEKGDEVNNLEIGDRVVIAFDLACGQCSFCKRHEYAACDTTNDSKLMDVN 153
Query: 454 ------STVGIWR-----DGGWAQYVKVPQDQVYL--LPDGVSTEQGGLCEPYSCVAHGY 594
+ G + G A+Y++VP ++ LPD + +G C +
Sbjct: 154 YGSHHSAIFGYTKLLGDVPGCQAEYIRVPFAEINCCKLPDDIPDSEGLFMSDVLCTSLHA 213
Query: 595 DRASPLLVGEKILIVGAGIIG 657
+ G+ + I G G IG
Sbjct: 214 CTLGEVKKGDTVAIWGMGPIG 234
>SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 55.6 bits (128), Expect = 8e-09
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 205 VIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGKKSV-FRNGQKVVVDP 381
V VKV++S +C TD + + G P P+ LGHE +G + +G+ + R G V++
Sbjct: 37 VRVKVDWSAVCHTDAYTLSGVDPEGAF-PIVLGHEGAGIVESIGEGVINVRPGDHVILLY 95
Query: 382 NRACSLCDFCRKGKYQYCLTAGINSTVGIWRDG 480
C C FCR GK C G+ DG
Sbjct: 96 TPECKECKFCRSGKTNLCSKIRETQGRGLMPDG 128
>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 52.4 bits (120), Expect = 7e-08
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 205 VIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGKK-SVFRNGQKVVVDP 381
V +K+ SG+C TD + + G+ P P+ LGHE +G + VG + + + G V+
Sbjct: 40 VRIKIVNSGVCHTDAYTLSGKDPEGL-FPVILGHEGAGIVESVGPQVTTVQVGDPVIALY 98
Query: 382 NRACSLCDFCRKGKYQYCLTAGINSTVGIWRDG 480
C C FC+ GK C G+ DG
Sbjct: 99 TPECKTCKFCKSGKTNLCGRIRTTQGKGLMPDG 131
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 29.5 bits (63), Expect = 0.57
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +1
Query: 454 STVGIWRDGGWAQYVKVPQDQVYLLPDGVS-TEQGGLCEPYSCVAHGYDRASPLLVGEKI 630
S + +DG A+Y +P+ +P +S TE + P++ R + +
Sbjct: 94 SELSFTKDGTHAEYCIIPEKAAVRMPSNLSFTEAASVGVPFTTAYLALSRGE-TKGSDIV 152
Query: 631 LIVGA-GIIGNLWVTSLHQLGHRDVTVSXMNKVRLEIV 741
L+VGA G +G+ G + +TVS + V
Sbjct: 153 LVVGALGAVGSAVCQIAEDWGCKVITVSRSGSTDINTV 190
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 265 EFPASKERPLPLGHEFSGTITDVGKKSVFRNGQKVVVDPNRACSLC 402
EF + KE+ + L + TIT++ + ++ G +VD NR +LC
Sbjct: 172 EFESQKEKLVYLSADSDNTITELDEDKIYIIG--AIVDKNRYKNLC 215
>SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 625 KILIVGAGIIGNLWVTSLHQLGHRDVTVSXMNKVRLEIVNK 747
KILI+GAG +G + L G RD++V M+ + + +N+
Sbjct: 46 KILIIGAGGLGCEILKDLALSGFRDLSVIDMDTIDITNLNR 86
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 249 THCTG*VSGFQRAPPTAWSRIQWHHYG 329
T+ T SGF+ APP AW H YG
Sbjct: 652 TNVTRKFSGFESAPPAAWYLQFSHLYG 678
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 581 WRTATIALPLYLSERKSSSSE-PELLVTCGSR 673
W TA IAL Y E S+ E +LLV C S+
Sbjct: 1287 WNTALIALMTYYREAAISTPELLDLLVKCESK 1318
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = -3
Query: 477 VPPDPDGTVNTGGQAVLVFSFTTEITEAAGSVRIHDDLLTVP 352
+PP V+ G +V S+ + +E+ + H +L T+P
Sbjct: 605 LPPGAMANVSAGPSSVRSSSYNSTASESKSEITSHQNLHTIP 646
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 625 KILIVGAGIIGNLWVTSLHQLGHRDVTVSXMNKVRLEIVNK 747
K+L+VGAG IG + +L G ++V + ++ + L +N+
Sbjct: 27 KVLLVGAGGIGCELLKNLLMSGVKEVHIIDLDTIDLSNLNR 67
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 9.4
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -3
Query: 459 GTVNTGGQAVLVFSFTTEITEAAGSVRIHDDLLTVPEDRLLPNIRNGATEFVT 301
GT+ +G Q FTT I +A+GSV + +++ + I +G+ F T
Sbjct: 906 GTLTSGSQF-----FTTTIAQASGSVSGNVEVIEPSGSTVTSTIYSGSESFTT 953
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,243,600
Number of Sequences: 5004
Number of extensions: 65847
Number of successful extensions: 199
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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