Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F13
(788 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 3e-48
SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 2e-42
SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13) 101 7e-22
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 38 0.009
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 34 0.11
SB_25802| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12) 31 1.4
SB_2180| Best HMM Match : DUF293 (HMM E-Value=4.2) 30 1.9
SB_27017| Best HMM Match : WD40 (HMM E-Value=5.8e-12) 29 3.2
SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_22337| Best HMM Match : FYVE (HMM E-Value=1.3e-05) 29 4.3
SB_43254| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_50420| Best HMM Match : RelA_SpoT (HMM E-Value=0) 28 7.5
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_6796| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_57921| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15) 28 9.9
>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 189 bits (460), Expect = 3e-48
Identities = 89/206 (43%), Positives = 128/206 (62%), Gaps = 2/206 (0%)
Frame = +1
Query: 175 PLPKLXNXXXVIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGK--KSV 348
P+P + N VIVKV YSGIC DL I++GE PA+K + LGHEFSG ++DVG K+V
Sbjct: 66 PVPHVSNPSEVIVKVAYSGICDRDLQILEGELPAAK--CVVLGHEFSGVVSDVGSDVKNV 123
Query: 349 FRNGQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQVYLL 528
G +VVV+PN +C+ C CR+G+ +C G S +G+W++GGW QY +V ++++
Sbjct: 124 -SIGDRVVVNPNSSCNTCKACRRGQPHFCEKGGTGSAIGVWKNGGWTQYARVHAPNIHIV 182
Query: 529 PDGVSTEQGGLCEPYSCVAHGYDRASPLLVGEKILIVGAGIIGNLWVTSLHQLGHRDVTV 708
P VS +Q LCEP SCV HG D+ P KIL+ G G+ G LW+ LH G+R VTV
Sbjct: 183 PPQVSLKQAALCEPISCVLHGLDKLHPAARDSKILVSGTGVTGLLWMCILHFHGYRRVTV 242
Query: 709 SXMNKVRLEIVNKLXTGYRLVTPDVL 786
++ + L G++++ PD +
Sbjct: 243 IEFSEQWRMLAMGLSLGFKILHPDTV 268
>SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 169 bits (412), Expect = 2e-42
Identities = 82/205 (40%), Positives = 123/205 (60%), Gaps = 1/205 (0%)
Frame = +1
Query: 175 PLPKLXNXXXVIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGKKSVFR 354
P P + + V+VK+ YS + GTDLH+++G +K + LGH+F G + ++G
Sbjct: 18 PTPHVQSPRDVVVKIAYSAVSGTDLHVLEGRIDCAKS--IILGHQFVGIVKEIGADVQHV 75
Query: 355 N-GQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQVYLLP 531
+ G +VV++P +C +CDFC KG+ C G N+ +GI R+GGWAQ+ ++ V LP
Sbjct: 76 SVGDRVVINPLTSCGICDFCLKGQPHLCKVEGKNTAIGIKRNGGWAQFCRLSAKNVIPLP 135
Query: 532 DGVSTEQGGLCEPYSCVAHGYDRASPLLVGEKILIVGAGIIGNLWVTSLHQLGHRDVTVS 711
V+ EQ EP SC+ G+D PL ++LI GAG G LW + LH G+R+V +S
Sbjct: 136 HQVTFEQALFSEPMSCILRGWDLLVPLQTDAEVLICGAGNSGLLWASFLHFRGYREVVIS 195
Query: 712 XMNKVRLEIVNKLXTGYRLVTPDVL 786
+ K R +I + L G++LVTPDVL
Sbjct: 196 EVLKGRQKIAHGLNFGFQLVTPDVL 220
>SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13)
Length = 303
Score = 101 bits (242), Expect = 7e-22
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Frame = +1
Query: 205 VIVKVEYSGICGTDLHIVQ----GEFPASKERPLPLGHEFSGTITDVGKK-SVFRNGQKV 369
V + + GICG+D+H + G+F + P+ LGHE SG I VG+ S + G +V
Sbjct: 22 VQISMHTVGICGSDVHYWKHGCIGDFVLTA--PMVLGHESSGVICAVGEGVSDLKEGDRV 79
Query: 370 VVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQVYLLPDGVSTE 549
++P C C +C+KG+Y C A +N G + D Y LPD VS E
Sbjct: 80 AIEPGTPCRTCSYCKKGRYNLC--AKMNFCATPPYHGSLCRRYNHQADFCYKLPDHVSLE 137
Query: 550 QGGLCEPYSCVAHGYDRASPLLVGEKILIVGAGIIGNLWVTSLHQLGHRDVTVSXMNKVR 729
+G L EP S H +RA + +G +L+ GAG IG + + + G V ++ +++ R
Sbjct: 138 EGALLEPLSVGVHACNRAG-ITIGSNVLVCGAGPIGLVTLLTAKACGASKVAITDLDEGR 196
Query: 730 LEIVNKLXTGYRL 768
L+ +L Y +
Sbjct: 197 LKKARELGADYTI 209
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 118 MXAVVFXGKTLXLKX-AHKYPLPKLXNXXXVIVKVEYSGICGTDLHIVQGEFPASKERPL 294
M +VV G K KY PK V+VKV G+ DL QG FP + + P
Sbjct: 39 MRSVVLTGHGGNNKIKVEKYARPKPMQGQ-VVVKVHACGVTFADLLQRQGHFPLAPKPPY 97
Query: 295 PLGHEFSGTITDVGKK 342
G E SG + ++G++
Sbjct: 98 VCGFECSGVVEELGEE 113
>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
Length = 676
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 205 VIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGK--KSVFRNGQKVV 372
V+VK Y+GI TD++ G + + P G E G + GK K F GQ V+
Sbjct: 41 VLVKTRYAGINATDINHTAGRYKPWNKPPFDAGLEGLGEVVATGKDYKGKFSVGQPVM 98
>SB_25802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/82 (28%), Positives = 36/82 (43%)
Frame = +2
Query: 395 ASVISVVKENTSTA*PPVLTVPSGSGGTEAGPXXXXXXXXXXXXYLTACPRNKVAYASHI 574
A+ ++ V T+TA PP T + T A P Y+T P +
Sbjct: 20 AAEMATVSSPTTTATPPYDTTTTPLYDTTATPSYVTTATPS---YVTTAPVYSSETTTAA 76
Query: 575 LAWRTATIALPLYLSERKSSSS 640
A+ ++ A P+YLSE +S+S
Sbjct: 77 SAYPSSYTAAPVYLSETTTSAS 98
>SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12)
Length = 1338
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 553 LVPWTRRQVGGRPDPAAPSRTGPSLRP 473
+VPW+ + G P AAP+ T P + P
Sbjct: 811 MVPWSSKMTGSIPISAAPAVTAPEIHP 837
>SB_2180| Best HMM Match : DUF293 (HMM E-Value=4.2)
Length = 289
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 478 GGWAQYVKVPQDQVYLLPDGVSTEQGGLCEPYSCVAH 588
G W +Y + +DQV +PD +S E C A+
Sbjct: 137 GSWTRYHVLSEDQVIKVPDYISVEMAATLSVNPCTAY 173
>SB_27017| Best HMM Match : WD40 (HMM E-Value=5.8e-12)
Length = 490
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 433 CLTAGINSTVGIWRDGGWAQYVKVPQDQVYLLPDGVSTEQGGLCEPY 573
C+ AGI + R+GG+ +Y+ +P + + + E+ PY
Sbjct: 289 CIVAGIQEVISDGREGGYGRYLMLPLEIIPAVKQPALPERHEAWAPY 335
>SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 486 PASVPPDPDGTVNTGGQAVLVFSFTTEITEAAGSVRIHDDLLT-VPEDR 343
P V +PDG ++G + V + +T +HD+ +T VPE R
Sbjct: 390 PKKVKSNPDGLRDSGARYATVKTLCVIVTACISQASLHDNHITLVPEAR 438
>SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -3
Query: 408 EITEAAGSVRIHDDLLTVPEDRLLPNIRNGATEFVTKR*GALFGSRKLT 262
E+ EAA IHD +L +P+ PNI + A VTK ++F + +L+
Sbjct: 516 EVHEAARMAEIHDAILRMPKGYDTPNILS-ALRRVTKGRTSIFIAHRLS 563
>SB_22337| Best HMM Match : FYVE (HMM E-Value=1.3e-05)
Length = 47
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 559 LCEPYSCVAHGYDRA 603
+C P+SCV HGY +A
Sbjct: 17 VCSPHSCVVHGYGKA 31
>SB_43254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 613 VEGKRDRSRAPRKNMARIGHLVPWTRRQVGGRPD 512
V+ + S P + I HL P TR GG PD
Sbjct: 332 VQSENKVSHPPFLRVTPISHLSPTTREMAGGEPD 365
>SB_50420| Best HMM Match : RelA_SpoT (HMM E-Value=0)
Length = 278
Score = 28.3 bits (60), Expect = 7.5
Identities = 27/89 (30%), Positives = 35/89 (39%)
Frame = -1
Query: 506 GTFTYWAQPPSRQIPTVLLIPAVKQYWYFPLRQKSQRLQALFGSTTTF*PFLKTDFFPTS 327
G +WA + T I A Q W Q LQ GS+ F +K+D FP
Sbjct: 191 GVAAHWAYKEHGETSTTAQIRA--QRWM----QSLLELQQSAGSSFEFIESVKSDLFPDE 244
Query: 326 VMVPLNS*PSGRGRSLEAGNSPCTMCRSV 240
+ V P GR L AG +P +V
Sbjct: 245 IYVFT---PEGRIVELPAGATPVDFAYAV 270
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 568 ARIGHLVPWTRRQVGGRPDPAAPSRTGPS 482
AR+ VPW R+ +G P P PS
Sbjct: 1556 ARVAQFVPWIRKYIGSTTLPITPPPPTPS 1584
>SB_6796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 925
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 675 GRDPQVTNNSGSDDEDFLSDK 613
G DP +TNN G+ D+ +DK
Sbjct: 268 GADPTITNNEGATPFDYCTDK 288
>SB_57921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Frame = +1
Query: 94 QRNTPXFKMXAVVFXGKTLXLKXAHKYPLPKLXNXXXVIVKVEYSGICGTDLHIVQG--- 264
Q TP + +T LK + P + + V+VKV S + D+ + +G
Sbjct: 67 QNTTPIMDAWCIRNYTETDNLKL-ETFDTPDIESDAEVLVKVHASSVNPIDVEMRRGYGT 125
Query: 265 -------EFPASKERPLPLGHEFSGTITDVGKK-SVFRNGQKV 369
+ +E PL G +FSG + G++ FR G +V
Sbjct: 126 NLLNTWRKLVGVEEFPLICGRDFSGVVVKTGRRVRRFRPGMEV 168
>SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3003
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 391 CSLCDFCRKGKYQYCLTA 444
C+ C FC+ K+ Y LTA
Sbjct: 1899 CNACGFCKYAKFDYTLTA 1916
>SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)
Length = 1215
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +1
Query: 379 PNRACSL-CDFCRKGKYQYCLTAGINSTVGIWRDGGWAQY---VKVPQDQVYLLPDGVST 546
P +A ++ C C G YC G+N+T G+ + G + + + P + +
Sbjct: 884 PGQASNITCQKCDAG--YYCSKPGMNATEGLCQPGYYCRQGSPSETPDNGNCTNDNSTGY 941
Query: 547 EQGGLCEP-YSCV 582
+ GG+C P Y C+
Sbjct: 942 DYGGVCPPGYYCL 954
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,024,250
Number of Sequences: 59808
Number of extensions: 558375
Number of successful extensions: 1477
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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