Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_F13
         (788 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    27   0.66 
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   4.7  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3

Query: 84  SRIATQHTXIQNGGGRFRWXNFXIKXRAQVSIAEAXKRRXRHCESG 221
           +R+ATQ   +++     RW N+ I  R+ + +     +R  H   G
Sbjct: 319 TRLATQQQLLEHALYATRWYNYPIAFRSSIRMMLRQSQRHAHITVG 364


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 550 VPWTRRQVGGRPDPAAPSRTGPSLRP 473
           +PW R+++   P P  P     +LRP
Sbjct: 447 IPWKRQKLVLLPKPGKPPDDASALRP 472


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,610
Number of Sequences: 2352
Number of extensions: 18523
Number of successful extensions: 31
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)