Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F13
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 107 1e-23
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 105 3e-23
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 67 2e-11
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 64 1e-10
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 63 3e-10
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 51 1e-06
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 51 1e-06
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 48 8e-06
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 48 1e-05
Z81044-9|CAB02812.2| 677|Caenorhabditis elegans Hypothetical pr... 31 0.94
AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin rece... 31 0.94
AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical ... 31 0.94
U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p... 29 2.9
Z81122-6|CAB03358.1| 663|Caenorhabditis elegans Hypothetical pr... 29 3.8
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 29 5.0
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 29 5.0
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 29 5.0
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 29 5.0
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 28 8.8
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 28 8.8
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 107 bits (256), Expect = 1e-23
Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 3/214 (1%)
Frame = +1
Query: 118 MXAVVFXGKTLXLKXAHKYPLPKLXNXXXVIVKVEYSGICGTDLHIVQGEFPAS--KERP 291
+ AV++ L L+ A P+ K V+VK+ GICG+D+H + S + P
Sbjct: 6 LSAVLYGINDLRLEQA---PISK-PGPRQVLVKINTVGICGSDVHFLTHGAIGSFVVKEP 61
Query: 292 LPLGHEFSGTITDVGKK-SVFRNGQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGI 468
+ LGHE SG ++++G + F+ G ++ ++P C LC+ C+ G+Y C +T +
Sbjct: 62 MVLGHESSGVVSEIGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMRFFATPPV 121
Query: 469 WRDGGWAQYVKVPQDQVYLLPDGVSTEQGGLCEPYSCVAHGYDRASPLLVGEKILIVGAG 648
+G +++V D + LPD +S E G L EP S VA R + +G+KIL++GAG
Sbjct: 122 --NGALSRFVVHDADFCFKLPDNLSFEDGALLEPLS-VAIQACRRGTVQMGQKILVLGAG 178
Query: 649 IIGNLWVTSLHQLGHRDVTVSXMNKVRLEIVNKL 750
IG L + + +G V ++ +N RL + L
Sbjct: 179 PIGVLNLLTAKAIGASKVVITDLNDERLALARLL 212
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 105 bits (253), Expect = 3e-23
Identities = 62/195 (31%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
Frame = +1
Query: 175 PLPKLXNXXXVIVKVEYSGICGTDLHI-VQGEF-PASKERPLPLGHEFSGTITDVGKK-S 345
P+PK V+VKV GICG+D+H G P + P+ +GHE SG +++VG +
Sbjct: 22 PIPK-PGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETSGIVSEVGNEVK 80
Query: 346 VFRNGQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQVYL 525
+ G ++ ++P C LC+ C+ G+Y C +T + G +++V D +
Sbjct: 81 HLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPPV--HGTLSRFVVHDADFCFK 138
Query: 526 LPDGVSTEQGGLCEPYSCVAHGYDRASPLLVGEKILIVGAGIIGNLWVTSLHQLGHRDVT 705
LPD +S E G L EP S H R + + +G ++L++GAG IG L + + +G V
Sbjct: 139 LPDNLSFEDGALIEPLSVAIHACRRGN-VQMGHRVLVLGAGPIGVLNLITAKAVGAGKVV 197
Query: 706 VSXMNKVRLEIVNKL 750
++ ++ RL + KL
Sbjct: 198 ITDLDDGRLALAKKL 212
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 66.9 bits (156), Expect = 2e-11
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Frame = +1
Query: 205 VIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGKKSVFRN-GQKVVVD- 378
++VK+EYSGIC +DLH +G+F + PL GHE +GT+ +G K N G + +
Sbjct: 37 LLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVTIGSKVKGWNIGDRAGIKL 96
Query: 379 PNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQ-DQVYLLPD-GVSTEQ 552
N C C++C+ G C GI R G + +Y+ + D + + D ++
Sbjct: 97 INANCLNCEYCKTGHEPLC---DHIQNYGIDRHGTFQEYLTIRDIDAIKVSNDTNLAAAA 153
Query: 553 GGLCEPYSCVAHGYDRASPLLVGEKILIVGA-GIIGNLWVTSLHQLGHRDVTVSXMNK 723
LC A+ +A+ + G+ +++ GA G +G+ + +G R V V ++K
Sbjct: 154 PVLCG--GVTAYKSLKATNVKPGQIVVLTGAGGGLGSFGIQYAKAMGMRVVAVDHISK 209
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 64.1 bits (149), Expect = 1e-10
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 3/188 (1%)
Frame = +1
Query: 175 PLPKLXNXXXVIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGKK-SVF 351
P+P+ N ++VK+EYSGIC +D+H G+F + P+ GHE +G++ VG K +
Sbjct: 28 PIPQ-PNEDELLVKMEYSGICHSDVHTWLGDFHYVSKCPMIGGHEGAGSVISVGSKVKNW 86
Query: 352 RNGQKVVVDPNRA-CSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQVYLL 528
+ G KV + + C C++C+ G C +G+ + G + +Y + +
Sbjct: 87 QIGDKVGIKLVQGNCLNCEYCQTGHEPLCPHVW---NIGVQKYGTFQEYATIRDVDAIKI 143
Query: 529 PDGVSTEQGGLCEPYSCVAHGYDRASPLLVGEKILIVGA-GIIGNLWVTSLHQLGHRDVT 705
P ++ A+ + S + G+ + + GA G +G+ + +G R V
Sbjct: 144 PKSMNMAAAAPVLCGGVTAYKALKESEVKSGQIVAVTGAGGGLGSFAIQYARAMGMRVVA 203
Query: 706 VSXMNKVR 729
+ +R
Sbjct: 204 EDIVAHIR 211
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 62.9 bits (146), Expect = 3e-10
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Frame = +1
Query: 205 VIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGKK-SVFRNGQKVVVD- 378
++VK+EYSGIC +DLH+ G+ PL GHE +G++ +GK + ++ G K V
Sbjct: 36 ILVKIEYSGICHSDLHVWLGDLKDMSVCPLVGGHEGAGSVVQIGKNVTGWQLGDKAGVKL 95
Query: 379 PNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKV-PQDQVYLLPD-GVSTEQ 552
N C C+FC+KG C G R G + +Y+ + D + D ++
Sbjct: 96 MNFNCLNCEFCKKGHEPLCHHI---QNYGFDRSGTFQEYLTIRGVDAAKINKDTNLAAAA 152
Query: 553 GGLCEPYSCVAHGYDRASPLLVGEKILIVGA-GIIGNLWVTSLHQLGHRDVTVSXMNK 723
LC + + S + G+ I++ GA G +G+L + +G R V + +K
Sbjct: 153 PILCA--GVTVYKALKESNVAPGQIIVLTGAGGGLGSLAIQYACAMGMRVVAMDHGSK 208
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 205 VIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGK-KSVFRNGQKVVVDP 381
V VK+ Y+ +C TD + + G P P+ LGHE SG + VG+ + F G VV
Sbjct: 38 VRVKILYTAVCHTDAYTLDGHDPEGL-FPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLY 96
Query: 382 NRACSLCDFCRKGKYQYCLTAGINSTVGIWRDG 480
C C++C+ K C I+ G DG
Sbjct: 97 VPQCKECEYCKNPKTNLCQKIRISQGNGFMPDG 129
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 205 VIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGK-KSVFRNGQKVVVDP 381
V VK+ Y+ +C TD + + G P P+ LGHE SG + VG+ + F G VV
Sbjct: 38 VRVKILYTAVCHTDAYTLDGHDPEGL-FPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLY 96
Query: 382 NRACSLCDFCRKGKYQYCLTAGINSTVGIWRDG 480
C C++C+ K C I+ G DG
Sbjct: 97 VPQCKECEYCKNPKTNLCQKIRISQGNGFMPDG 129
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 48.0 bits (109), Expect = 8e-06
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 223 YSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGK-KSVFRNGQKVVVDPNRACSL 399
Y+ +C TD + + G P P+ LGHE SG + VGK + F G VV C
Sbjct: 217 YTSVCHTDAYTLDGHDPEGLF-PVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCKE 275
Query: 400 CDFCRKGKYQYCLTAGINSTVGIWRDG 480
C++C+ K C ++ G DG
Sbjct: 276 CEYCKNPKTNMCQKIRVSQGDGFMPDG 302
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +1
Query: 181 PKLXNXXXVIVKVEYSGICGTDLHIVQGEFPASKERPLPLGHEFSGTITDVGKKSV-FRN 357
P + V ++ Y+ +C TD + + G P P+ LGHE SG + VG+ F
Sbjct: 32 PPKAHEVRVKFQILYTAVCHTDAYTLDGHDPEGLF-PVVLGHEGSGIVESVGEGVTGFAP 90
Query: 358 GQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDG 480
G VV C C++C+ K C I+ G DG
Sbjct: 91 GDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDG 131
>Z81044-9|CAB02812.2| 677|Caenorhabditis elegans Hypothetical
protein C30H6.6 protein.
Length = 677
Score = 31.1 bits (67), Expect = 0.94
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 430 YCLT-AGINSTVGIWRDGGWAQYVKVPQDQVYLLPDGVSTEQGGLCEPYSCVAHGYDRAS 606
YCL AG+N VG R ++ ++ QD + D + G V GY +S
Sbjct: 157 YCLQIAGVN-IVGSLRKMVYSSIIR--QDMTFF--DKNMVGEIGSRHAADTVIVGYSVSS 211
Query: 607 PLLVGEKILIVGAGIIGNLWVTSL 678
L G + ++VG G IG + +TSL
Sbjct: 212 SLRAGVRAVLVGVGSIGMMLMTSL 235
>AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin
receptor-like proteinSEB-3 protein.
Length = 454
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 358 GQKVVVD-PNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQVYLL 528
GQ++ D P C+ C + K +Y ++ NS +G+W+D + +KV ++ L
Sbjct: 44 GQQMTRDCPFTFCTAIPGCEEIKDRYMVSRNCNS-MGVWQDSNYTMCIKVVEEYAQCL 100
>AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical
protein C18B12.2 protein.
Length = 454
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 358 GQKVVVD-PNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQVYLL 528
GQ++ D P C+ C + K +Y ++ NS +G+W+D + +KV ++ L
Sbjct: 44 GQQMTRDCPFTFCTAIPGCEEIKDRYMVSRNCNS-MGVWQDSNYTMCIKVVEEYAQCL 100
>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
protein C06A5.1 protein.
Length = 1932
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 332 LGRSLSSGTVRRSSWIRTEPAASVISVVKENTSTA*P 442
+G S+ GT+ R SWI E +A ++ ++ + T P
Sbjct: 206 IGMSVGLGTMNRCSWIEKECSAELVKMILDPFETVYP 242
>Z81122-6|CAB03358.1| 663|Caenorhabditis elegans Hypothetical
protein T13F2.7 protein.
Length = 663
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 489 GPASVPPDPDGTVNTGGQAVLVFSFT-TEITEAAGSVRIHDD 367
G + D DG V GG+A+ S+ T+A+G VR +DD
Sbjct: 405 GDVDMDSDDDGNVTIGGEALSFDSWARITKTKASGVVRANDD 446
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 641 PTMRIFSPTSRGEARS*PCATQEYGSHRPPCSVDTP 534
P ++ +S S +R PC T + +H P DTP
Sbjct: 21 PKVKDYSRLSSSPSRDQPCETSYFENHFPSLECDTP 56
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 641 PTMRIFSPTSRGEARS*PCATQEYGSHRPPCSVDTP 534
P ++ +S S +R PC T + +H P DTP
Sbjct: 21 PKVKDYSRLSSSPSRDQPCETSYFENHFPSLECDTP 56
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 641 PTMRIFSPTSRGEARS*PCATQEYGSHRPPCSVDTP 534
P ++ +S S +R PC T + +H P DTP
Sbjct: 21 PKVKDYSRLSSSPSRDQPCETSYFENHFPSLECDTP 56
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 641 PTMRIFSPTSRGEARS*PCATQEYGSHRPPCSVDTP 534
P ++ +S S +R PC T + +H P DTP
Sbjct: 21 PKVKDYSRLSSSPSRDQPCETSYFENHFPSLECDTP 56
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 613 LVGEKILIVGAGIIGNLWVTSLHQLGHRDVTVSXMNKVRLEIVNK 747
+V KIL++GAG IG + +L G R V V ++ + + +N+
Sbjct: 11 IVQSKILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNR 55
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 273 GFQRAPPTAWSRIQWHHYGCWEEVCLQERSEGRRGSEQ 386
G + P W ++ HHY +E LQ+ +G+R Q
Sbjct: 1205 GTEEQDPNYWEKLLKHHYEQDQETELQKLGKGKRVRRQ 1242
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 273 GFQRAPPTAWSRIQWHHYGCWEEVCLQERSEGRRGSEQ 386
G + P W ++ HHY +E LQ+ +G+R Q
Sbjct: 1205 GTEEQDPNYWEKLLKHHYEQDQETELQKLGKGKRVRRQ 1242
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 273 GFQRAPPTAWSRIQWHHYGCWEEVCLQERSEGRRGSEQ 386
G + P W ++ HHY +E LQ+ +G+R Q
Sbjct: 1205 GTEEQDPNYWEKLLKHHYEQDQETELQKLGKGKRVRRQ 1242
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 442 AGINSTVGIWRDGGWAQYVKVPQD 513
AG ++ + IWR+ Q++KVP+D
Sbjct: 272 AGDDNVITIWRENLQGQWIKVPRD 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,648,364
Number of Sequences: 27780
Number of extensions: 396289
Number of successful extensions: 1079
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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