Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F12
(828 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 38 0.013
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_12758| Best HMM Match : EGF (HMM E-Value=2.5e-15) 31 1.5
SB_40116| Best HMM Match : EGF (HMM E-Value=0) 30 2.6
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 30 2.6
SB_3772| Best HMM Match : EGF (HMM E-Value=6.3e-06) 30 2.6
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 30 2.6
SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11) 29 3.5
SB_908| Best HMM Match : DUF1682 (HMM E-Value=3.1e-38) 29 3.5
SB_17302| Best HMM Match : Pentaxin (HMM E-Value=1e-09) 29 4.6
SB_43565| Best HMM Match : EGF (HMM E-Value=2.8e-05) 29 6.1
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_17040| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_6561| Best HMM Match : HEAT (HMM E-Value=0.028) 29 6.1
SB_58558| Best HMM Match : EGF (HMM E-Value=0) 28 8.0
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 28 8.0
SB_25361| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.0
SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1487
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/43 (48%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 680 CCEGYAPDADGEQCVPVCVESCVXGKMCXAEHVYVCSWIW-GP 805
C GY G QCVPVC + CV GK C + V CS+ W GP
Sbjct: 220 CKPGYEQALSG-QCVPVCTQGCVNGK-CTSPDVCTCSFGWTGP 260
Score = 35.1 bits (77), Expect = 0.070
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSCDI 818
KC P+ CTC+ G+ GP+C +
Sbjct: 244 KCTSPDVCTCSFGWTGPNCSV 264
>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
Length = 635
Score = 37.5 bits (83), Expect = 0.013
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 759 CVXPNTCTCAHGYGGPSCD 815
CV P+ CTC GY GPSCD
Sbjct: 109 CVKPDNCTCHPGYDGPSCD 127
Score = 35.9 bits (79), Expect = 0.040
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Frame = +2
Query: 494 GPNVCTRQEPYTTIIRVSKQQPYQVKEKAWC-------FSMLPRCTKYSIKFRQVFRTET 652
G NVCTR + +T + QQ + + C + C + + +R V++
Sbjct: 15 GLNVCTRTQSFTESYSQAAQQSFYQQISKQCRVQQGGPWFRYKVCYEQKVAYRTVYKQLY 74
Query: 653 LTKYRLXEECCEGYAPDADGEQC-VPVCVESCVXG 754
R CC G+A G C P+C + C G
Sbjct: 75 RKAQRTVLLCCSGWA--QSGNSCPTPICSKGCAQG 107
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 32.3 bits (70), Expect = 0.49
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 759 CVXPNTCTCAHGYGGPSCD 815
C+ P+TC C G+ GPSC+
Sbjct: 206 CMAPDTCECYPGWDGPSCN 224
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 759 CVXPNTCTCAHGYGGPSC 812
CV NTC C GY G C
Sbjct: 90 CVASNTCRCHPGYQGSRC 107
>SB_12758| Best HMM Match : EGF (HMM E-Value=2.5e-15)
Length = 165
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSC 812
+CV P+ C C GY GP C
Sbjct: 109 ECVRPDVCKCRAGYEGPLC 127
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 759 CVXPNTCTCAHGYGGPSC 812
CV P TC C GY G C
Sbjct: 78 CVAPRTCRCPKGYYGIGC 95
>SB_40116| Best HMM Match : EGF (HMM E-Value=0)
Length = 340
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 774 TCTCAHGYGGPSCD 815
TC CA GY GP+CD
Sbjct: 62 TCICAPGYTGPTCD 75
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 29.9 bits (64), Expect = 2.6
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 777 CTCAHGYGGPSCD 815
C CAHG+ GP+CD
Sbjct: 459 CRCAHGWEGPTCD 471
>SB_3772| Best HMM Match : EGF (HMM E-Value=6.3e-06)
Length = 519
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 759 CVXPNTCTCAHGYGGPSCD 815
CV NTC C GY G C+
Sbjct: 499 CVSRNTCACKKGYTGERCE 517
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 774 TCTCAHGYGGPSCD 815
TC CA GY GP+CD
Sbjct: 7108 TCICAPGYTGPTCD 7121
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 29.9 bits (64), Expect = 2.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 777 CTCAHGYGGPSCDI 818
C CA GY GP+CD+
Sbjct: 494 CICAAGYSGPNCDV 507
>SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11)
Length = 439
Score = 29.5 bits (63), Expect = 3.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 768 PNTCTCAHGYGGPSCDI 818
P+TC C GY GP+C +
Sbjct: 58 PDTCACRPGYTGPTCAV 74
>SB_908| Best HMM Match : DUF1682 (HMM E-Value=3.1e-38)
Length = 326
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 540 RIIVVYGSCLVQTLGPFSCAATVPVIINTENIL 442
R + V+G ++ LGP +C T PVII + L
Sbjct: 276 RRLEVWGGSVLTVLGPLACIVTKPVIIPVRDSL 308
>SB_17302| Best HMM Match : Pentaxin (HMM E-Value=1e-09)
Length = 550
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 455 VLIITGTVAAQLKGPNVCTRQEPYTT 532
+L T ++ +Q+ GP CT EPY T
Sbjct: 442 ILRATSSMTSQITGPQFCTTIEPYMT 467
>SB_43565| Best HMM Match : EGF (HMM E-Value=2.8e-05)
Length = 192
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSC 812
+C PNTC C G+ G C
Sbjct: 161 RCKAPNTCACLPGWTGNDC 179
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 777 CTCAHGYGGPSCDISGP 827
CTC HG+ G SC+ P
Sbjct: 397 CTCRHGFSGSSCESCQP 413
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 768 PNTCTCAHGYGGPSCDISGP 827
P++C C HGY G C + P
Sbjct: 4247 PSSCVCHHGYWGTDCSMVCP 4266
>SB_17040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 410 SMTTTQFKMYLRIFSVLIITGTVAAQLKGPNVCTRQEPYTTIIRVSKQQPYQV 568
+M T+Q K+ + S + V +Q K PN+ T Q ++ ++ PY+V
Sbjct: 20 NMVTSQRKVLNMVTSRRKVPNMVTSQRKVPNMVTSQRKVPNMVTGRRKVPYKV 72
>SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 680 CCEGYAPDADGEQCVPVCVESCVXGKMCXAEHVYVC 787
C GY P DG++CV C V G +C + C
Sbjct: 328 CNNGYKPSPDGKRCVGRC--GRVYGVVCIYKRTLCC 361
>SB_6561| Best HMM Match : HEAT (HMM E-Value=0.028)
Length = 1444
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -1
Query: 819 IYRXTGPHIH--EHTYTCSAXHIXPXTXDSTHTGTH 718
+Y +GPHI YT S HI P T +G H
Sbjct: 1024 VYSRSGPHIDPLRSVYTRSGPHIDPLRSVHTRSGPH 1059
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -1
Query: 819 IYRXTGPHIH--EHTYTCSAXHIXPXTXDSTHTGTH 718
+Y +GPHI YT S HI P T +G H
Sbjct: 1094 VYTRSGPHIDPLRSVYTRSGPHIDPLRSVCTKSGPH 1129
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -1
Query: 819 IYRXTGPHIH--EHTYTCSAXHIXPXTXDSTHTGTH 718
+Y +GPHI YT S HI P T +G H
Sbjct: 1178 VYTRSGPHIDPLRSVYTRSGPHIDPLRSVYTRSGPH 1213
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -1
Query: 819 IYRXTGPHIH--EHTYTCSAXHIXPXTXDSTHTGTH 718
+Y +GPHI YT S HI P T +G H
Sbjct: 1192 VYTRSGPHIDPLRSVYTRSGPHIDPLRSVYTRSGPH 1227
>SB_58558| Best HMM Match : EGF (HMM E-Value=0)
Length = 1101
Score = 28.3 bits (60), Expect = 8.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 774 TCTCAHGYGGPSCDIS 821
TC+CA GY G +C+I+
Sbjct: 488 TCSCAAGYSGVNCEIN 503
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 774 TCTCAHGYGGPSCDIS 821
TCTC GY G +CDI+
Sbjct: 1729 TCTCLPGYTGITCDIN 1744
>SB_25361| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 4833
Score = 28.3 bits (60), Expect = 8.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 774 TCTCAHGYGGPSCDI 818
TCTC GY G +CD+
Sbjct: 3759 TCTCKPGYTGQNCDV 3773
>SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 28.3 bits (60), Expect = 8.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 759 CVXPNTCTCAHGYGGPSCDI 818
C +C CA G+GG +C +
Sbjct: 309 CAADGSCVCAAGWGGSTCSL 328
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,814,152
Number of Sequences: 59808
Number of extensions: 446071
Number of successful extensions: 1562
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1560
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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