Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F12
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 33 0.25
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 33 0.25
AF067945-1|AAC17679.1| 312|Caenorhabditis elegans Serpentine re... 33 0.25
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 31 1.0
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 31 1.0
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 31 1.0
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 31 1.0
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 30 1.8
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 30 1.8
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 30 1.8
AF039053-11|AAC25879.1| 301|Caenorhabditis elegans Serpentine r... 30 2.3
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 29 3.1
U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical pr... 29 3.1
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 29 3.1
AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascula... 29 4.1
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 29 5.4
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 29 5.4
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 29 5.4
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 29 5.4
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 29 5.4
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 28 9.4
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 28 9.4
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 28 9.4
U64844-8|AAB18308.1| 330|Caenorhabditis elegans Serpentine rece... 28 9.4
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 28 9.4
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 33.1 bits (72), Expect = 0.25
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSCD 815
+CV PN C+CA G+ G C+
Sbjct: 186 RCVAPNQCSCADGFNGTRCE 205
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 768 PNTCTCAHGYGGPSCDI 818
PNTC C G+ G CDI
Sbjct: 223 PNTCKCRDGFIGDRCDI 239
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 33.1 bits (72), Expect = 0.25
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSCD 815
+CV PN C+CA G+ G C+
Sbjct: 186 RCVAPNQCSCADGFNGTRCE 205
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 768 PNTCTCAHGYGGPSCDI 818
PNTC C G+ G CDI
Sbjct: 223 PNTCKCRDGFIGDRCDI 239
>AF067945-1|AAC17679.1| 312|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 31 protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 207 LFVLFSSKCWTTWRKYFTKVY-CFELFNFWVWPNF 308
L V+F +K W + YF K+Y C FN W++ NF
Sbjct: 22 LTVVFLTKNWKHFDNYFLKLYICQFFFNMWMYWNF 56
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 31.1 bits (67), Expect = 1.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSCDIS 821
KC+ PN+C C G+ G +C ++
Sbjct: 836 KCIQPNSCECDAGWMGETCSVT 857
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 602 RCTKYSIKFRQVFRTETLTKYRLXEECCEGYAPDADGEQCVPVCVESCVXGK 757
+CT + ++ + + K + ++CC+GY D C+P C C GK
Sbjct: 79 QCTVEKRGQKASYQRQLVKKEKYVKQCCDGYYQTKD-HFCLPDCNPPCKKGK 129
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSC 812
KC+ P C C GYGG C
Sbjct: 129 KCIEPGKCECDPGYGGKYC 147
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +2
Query: 677 ECCEGYAPDAD-GEQCVPVCVESCVXGKMCXAEHVYVCSWIWG 802
E CE PD G CV C C G C E VCS WG
Sbjct: 188 ERCEKPCPDNKWGPNCVKSC--PCQNGGKCNKEGKCVCSDGWG 228
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 602 RCTKYSIKFRQVFRTETLTKYRLXEECCEGYAPDADGEQCVPVCVESCVXGK 757
+CT + ++ + + K + ++CC+GY D C+P C C GK
Sbjct: 79 QCTVEKRGQKASYQRQLVKKEKYVKQCCDGYYQTKD-HFCLPDCNPPCKKGK 129
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSC 812
KC+ P C C GYGG C
Sbjct: 129 KCIEPGKCECDPGYGGKYC 147
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +2
Query: 677 ECCEGYAPDAD-GEQCVPVCVESCVXGKMCXAEHVYVCSWIWG 802
E CE PD G CV C C G C E VCS WG
Sbjct: 188 ERCEKPCPDNKWGPNCVKSC--PCQNGGKCNKEGKCVCSDGWG 228
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 602 RCTKYSIKFRQVFRTETLTKYRLXEECCEGYAPDADGEQCVPVCVESCVXGK 757
+CT + ++ + + K + ++CC+GY D C+P C C GK
Sbjct: 79 QCTVEKRGQKASYQRQLVKKEKYVKQCCDGYYQTKD-HFCLPDCNPPCKKGK 129
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSC 812
KC+ P C C GYGG C
Sbjct: 129 KCIEPGKCECDPGYGGKYC 147
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +2
Query: 677 ECCEGYAPDAD-GEQCVPVCVESCVXGKMCXAEHVYVCSWIWG 802
E CE PD G CV C C G C E VCS WG
Sbjct: 188 ERCEKPCPDNKWGPNCVKSC--PCQNGGKCNKEGKCVCSDGWG 228
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 602 RCTKYSIKFRQVFRTETLTKYRLXEECCEGYAPDADGEQCVPVCVESCVXGK 757
+CT + ++ + + K + ++CC+GY D C+P C C GK
Sbjct: 79 QCTVEKRGQKASYQRQLVKKEKYVKQCCDGYYQTKD-HFCLPDCNPPCKKGK 129
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSC 812
KC+ P C C GYGG C
Sbjct: 129 KCIEPGKCECDPGYGGKYC 147
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +2
Query: 677 ECCEGYAPDAD-GEQCVPVCVESCVXGKMCXAEHVYVCSWIWG 802
E CE PD G CV C C G C E VCS WG
Sbjct: 188 ERCEKPCPDNKWGPNCVKSC--PCQNGGKCNKEGKCVCSDGWG 228
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 777 CTCAHGYGGPSCDIS 821
C CA+G+GG +CD+S
Sbjct: 661 CECANGFGGKNCDVS 675
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 777 CTCAHGYGGPSCD 815
C CA G+GGP CD
Sbjct: 623 CFCAAGFGGPKCD 635
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 777 CTCAHGYGGPSCDIS 821
C CA+G+GG +CD+S
Sbjct: 661 CECANGFGGKNCDVS 675
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 777 CTCAHGYGGPSCDIS 821
C CA+G+GG +CD+S
Sbjct: 661 CECANGFGGKNCDVS 675
>AF039053-11|AAC25879.1| 301|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 19 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.3
Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 2/119 (1%)
Frame = +2
Query: 320 FHLCVVKK*LNYTFSLINQMILFSKIF*WNSMTTTQFKMYLRIFSVLIITGTVAAQLK-G 496
FH +K + +T + + ++L +K+F +N + K R+ + +I T+
Sbjct: 173 FHYWTHQKSVTFTITFVCLLLLCAKLFIFNELGRNGRKELSRVNRLALIDSTIVCVFDFV 232
Query: 497 PNVCTRQEPYTTIIRVSKQQPYQVKEK-AWCFSMLPRCTKYSIKFRQVFRTETLTKYRL 670
PN Q + PY V K A C + C + R+ F+ + K RL
Sbjct: 233 PNFIANQFAHKQFFSFQNIGPYIVVTKLAGC--AIEACFVFWTFNRKTFKIKAQPKSRL 289
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 29.5 bits (63), Expect = 3.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 771 NTCTCAHGYGGPSCDISG 824
N C C G+GG CD++G
Sbjct: 343 NNCKCPPGFGGQLCDVAG 360
>U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical
protein C04E6.11 protein.
Length = 995
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 150 ELHKSYGDECLNLIFKNILLFVLFSSKCWTTWRKYFTKVYC 272
+LH S E L + F NILL L ++ +TW+K+ + ++C
Sbjct: 757 QLHPS---ESLTVFFINILLKRLGWAEALSTWQKFLSSLHC 794
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 29.5 bits (63), Expect = 3.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 771 NTCTCAHGYGGPSCDISG 824
N C C G+GG CD++G
Sbjct: 343 NNCKCPPGFGGQLCDVAG 360
>AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 2
protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 262 LVKYLRQVVQHFDENNTNNKIFLNIKFKHS 173
L+KYLR++ HF NN I L++ K S
Sbjct: 90 LLKYLRKLRSHFKNELCNNDIVLHVSEKES 119
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 774 TCTCAHGYGGPSCD 815
TC C G+ GPSCD
Sbjct: 1096 TCKCHEGFSGPSCD 1109
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSCDISG 824
KC +C C+ G+ G +C I G
Sbjct: 573 KCASDGSCKCSSGWNGENCAIDG 595
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 774 TCTCAHGYGGPSCD 815
TC C G+ GPSCD
Sbjct: 1096 TCKCHEGFSGPSCD 1109
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSCDISG 824
KC +C C+ G+ G +C I G
Sbjct: 515 KCASDGSCKCSSGWNGENCAIDG 537
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 756 KCVXPNTCTCAHGYGGPSCDISG 824
KC +C C+ G+ G +C I G
Sbjct: 697 KCASDGSCKCSSGWNGENCAIDG 719
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +2
Query: 404 WNSMTTTQFKMYLRIFSVLIITGTVAAQLKGPNVCTRQEP 523
W + +++L IFS+ GTV L+ P + ++P
Sbjct: 455 WKYVAMVLDRLFLLIFSIACFVGTVIILLRAPTLYDTRQP 494
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +2
Query: 404 WNSMTTTQFKMYLRIFSVLIITGTVAAQLKGPNVCTRQEP 523
W + +++L IFS+ GTV L+ P + ++P
Sbjct: 455 WKYVAMVLDRLFLLIFSIACFVGTVIILLRAPTLYDTRQP 494
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +2
Query: 404 WNSMTTTQFKMYLRIFSVLIITGTVAAQLKGPNVCTRQEP 523
W + +++L IFS+ GTV L+ P + ++P
Sbjct: 455 WKYVAMVLDRLFLLIFSIACFVGTVIILLRAPTLYDTRQP 494
>U64844-8|AAB18308.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein213 protein.
Length = 330
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 186 LIFKNILLFVLFSSKCWTTWR 248
L+F+N LL ++ +SKCW +R
Sbjct: 117 LVFENRLLILIPTSKCWRVFR 137
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 695 APDADGEQCVPVCVESCVXGKMCXAEHVYVCS 790
AP QC+P+C SC+ C + CS
Sbjct: 344 APTPCAAQCMPLCESSCIARLSCVQTCMPACS 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,085,252
Number of Sequences: 27780
Number of extensions: 346431
Number of successful extensions: 1479
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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