Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_F11
         (784 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132     30   1.8  
02_02_0641 + 12566416-12566599,12567132-12567327,12568319-125684...    30   2.4  
07_03_0523 + 19030078-19031109                                         29   3.2  
05_07_0360 + 29542854-29542900,29542988-29543129,29543207-295445...    29   5.5  
12_01_0819 + 7545656-7546006,7546087-7546162,7547196-7547401,754...    28   7.3  
07_03_0581 + 19678266-19678949                                         28   7.3  
06_03_1470 + 30371391-30372353                                         28   7.3  
10_06_0004 - 9407954-9408007,9408219-9408386,9408441-9408542,940...    25   8.0  

>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
          Length = 5436

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 224  GSSIWAHDVRFMAARITRTLVQRRPNIVYICXLIKFS 114
            G+  W H+  F  A + +TLV  +P   +   L++FS
Sbjct: 5254 GAHTWDHEYNFDGASLEKTLVLHKPTKCFEATLVEFS 5290


>02_02_0641 +
           12566416-12566599,12567132-12567327,12568319-12568406,
           12569279-12569330,12569423-12569765,12571282-12571684,
           12571770-12571841,12572632-12572817,12573174-12573239,
           12574802-12575174,12575917-12576014,12578179-12578305,
           12578734-12578924,12579265-12579540,12579837-12579866
          Length = 894

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 541 LYNENAHSCDWPENVDGCQKHPLC-NEDPNGNVPLG 645
           LYN    +CD P++ D C   PL  +E+P    P G
Sbjct: 581 LYNATLRNCDVPDDHDYCSVWPLIPSEEPTSVSPYG 616


>07_03_0523 + 19030078-19031109
          Length = 343

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 343 VCPQKQVHWGSRIVPIVRCHIPNTCRSI 260
           V P KQ+  G  + P VRC +P+T +++
Sbjct: 88  VVPPKQMRAGGAVPPKVRCGVPDTSKAL 115


>05_07_0360 +
           29542854-29542900,29542988-29543129,29543207-29544529,
           29544642-29544715,29545850-29545964,29546682-29546714
          Length = 577

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 190 INLTSCAQIEDPCKTKARIVADDKYCDKYWECD 288
           ++++  A    PCKTK R+   DK  D   ECD
Sbjct: 542 LHVSRLAPYSCPCKTKRRLEGHDKDEDDVVECD 574


>12_01_0819 +
           7545656-7546006,7546087-7546162,7547196-7547401,
           7547498-7547584,7547673-7547765,7548172-7548326,
           7548470-7548554,7548632-7548718,7548801-7548920,
           7549707-7549808,7549903-7550070
          Length = 509

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 466 GQRYRTASRSAP-CRLGDLSEPSGTRSNLTSKGNRSPQSP 350
           G+   T +   P  RLG +S+P   +S L+S+G+  P SP
Sbjct: 384 GKEKETIAEMLPYLRLGYISDPDEMQSILSSEGDTCPVSP 423


>07_03_0581 + 19678266-19678949
          Length = 227

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 627 R*RALRQVLQPVLAVPGRISSAAALP 704
           R R  +Q L P+LA+P  +SS+ ALP
Sbjct: 44  RLRIHQQFLPPILALPAALSSSMALP 69


>06_03_1470 + 30371391-30372353
          Length = 320

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = +1

Query: 571 WPENVDGCQKHPLC-NEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFD 723
           WP   DG      C  E+ NGN P        W C  G     R P  + ++
Sbjct: 146 WPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYN 197


>10_06_0004 -
           9407954-9408007,9408219-9408386,9408441-9408542,
           9408710-9408934,9409889-9410047,9411768-9411900,
           9412827-9413758,9413842-9413987,9415863-9416082
          Length = 712

 Score = 25.0 bits (52), Expect(2) = 8.0
 Identities = 16/57 (28%), Positives = 21/57 (36%)
 Frame = -1

Query: 412 SEPSGTRSNLTSKGNRSPQSPLDVCPQKQVHWGSRIVPIVRCHIPNTCRSICHRPLF 242
           S P    SNL    N     P D  P   ++      P + C++     S C  PLF
Sbjct: 411 SRPGTQISNLQGIWNDETSPPWDAAPHPNINLQMNYWPALPCNL-----SECQEPLF 462



 Score = 21.4 bits (43), Expect(2) = 8.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 238 LWSCTGPRFGHMMLGLWLPG 179
           LW+ T P  G  M  LW  G
Sbjct: 493 LWAKTSPDAGDPMWALWPMG 512


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,716,675
Number of Sequences: 37544
Number of extensions: 492744
Number of successful extensions: 1379
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)