Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F11
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 52 3e-10
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 52 3e-10
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 62 6e-10
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 47 1e-05
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 36 0.033
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 36 0.033
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 33 0.17
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 33 0.17
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 32 0.40
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 31 0.70
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 31 1.2
U80437-8|AAB37623.1| 630|Caenorhabditis elegans Exocyst compone... 28 6.6
U58764-1|AAB00723.2| 191|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC084153-13|AAK84583.1| 123|Caenorhabditis elegans Hypothetical... 28 6.6
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 28 8.7
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = +1
Query: 454 GIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGC----QKHPLCNED 621
GI + T + TC G A C L++N CDWP +V C P C ED
Sbjct: 253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTPQPTCEED 312
Query: 622 PNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXC 741
G G+ + + C G + CPA L F ++ C
Sbjct: 313 --GYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRC 350
Score = 47.6 bits (108), Expect(2) = 3e-10
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
Frame = +1
Query: 211 QIEDPCKTKARIVADDKYCD-KYWECDNGQSVQYDCPNGLVFAGKHRGVTEGCDYPWRSN 387
++E C+ KA + + C + C G + DCP LVF CD+P
Sbjct: 242 ELEPTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVF----NPTILVCDWPRDVA 297
Query: 388 YCEYPKAQINPPIGTEHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSC 567
C A + P T D G F + + C NG A C GL ++E+ C
Sbjct: 298 EC----AGLPTPQPTCEED---GYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRC 350
Query: 568 DWPENVDGCQK 600
D+ NV CQ+
Sbjct: 351 DYESNVSECQE 361
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 604 PLCNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXCVVP 750
P C +G P G + C GG R+ CPA LVF+ L C P
Sbjct: 245 PTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 484 RYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQ 597
++ TC G A C L+YNE CDW NV GC+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 34.7 bits (76), Expect(2) = 3e-10
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +1
Query: 589 GCQKHPLCNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXCVVPPT 756
G ++ C NG +G S R CQ G+ + CP+ LVF+ +SL C P T
Sbjct: 396 GVEEQNQCVGLDNGLHAIGCS-PRVLSCQNGHVDIFECPSSLVFNDQSLICDYPQT 450
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 610 CNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXC 741
C +G LG+ ++ C GG R+ CPA L+++ L C
Sbjct: 24 CTNALDGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLIC 67
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Frame = +1
Query: 283 CDNGQSVQYDCPNGLVFAGKHRGVTEGCDYPWRSNYCEYPKAQI--NPPIGTEHCDWLYG 456
C NG ++CP+ LVF + + CDYP S C + PI C G
Sbjct: 422 CQNGHVDIFECPSSLVFNDQ----SLICDYPQTSLKCLIEDTILIDETPIAAFDCS-TDG 476
Query: 457 IFGHETSCTRYWTCWNGTATEQLC 528
+F Y C G C
Sbjct: 477 LFSDGLCSATYHQCTAGQLINFTC 500
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 466 HETSCT-RYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGC 594
H C+ R +C NG C L++N+ + CD+P+ C
Sbjct: 411 HAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = +1
Query: 454 GIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGC----QKHPLCNED 621
GI + T + TC G A C L++N CDWP +V C P C ED
Sbjct: 253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTPQPTCEED 312
Query: 622 PNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXC 741
G G+ + + C G + CPA L F ++ C
Sbjct: 313 --GYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRC 350
Score = 47.6 bits (108), Expect(2) = 3e-10
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
Frame = +1
Query: 211 QIEDPCKTKARIVADDKYCD-KYWECDNGQSVQYDCPNGLVFAGKHRGVTEGCDYPWRSN 387
++E C+ KA + + C + C G + DCP LVF CD+P
Sbjct: 242 ELEPTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVF----NPTILVCDWPRDVA 297
Query: 388 YCEYPKAQINPPIGTEHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSC 567
C A + P T D G F + + C NG A C GL ++E+ C
Sbjct: 298 EC----AGLPTPQPTCEED---GYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRC 350
Query: 568 DWPENVDGCQK 600
D+ NV CQ+
Sbjct: 351 DYESNVSECQE 361
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 604 PLCNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXCVVP 750
P C +G P G + C GG R+ CPA LVF+ L C P
Sbjct: 245 PTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 484 RYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQ 597
++ TC G A C L+YNE CDW NV GC+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 34.7 bits (76), Expect(2) = 3e-10
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +1
Query: 589 GCQKHPLCNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXCVVPPT 756
G ++ C NG +G S R CQ G+ + CP+ LVF+ +SL C P T
Sbjct: 396 GVEEQNQCVGLDNGLHAIGCS-PRVLSCQNGHVDIFECPSSLVFNDQSLICDYPQT 450
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 610 CNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXC 741
C +G LG+ ++ C GG R+ CPA L+++ L C
Sbjct: 24 CTNALDGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLIC 67
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Frame = +1
Query: 283 CDNGQSVQYDCPNGLVFAGKHRGVTEGCDYPWRSNYCEYPKAQI--NPPIGTEHCDWLYG 456
C NG ++CP+ LVF + + CDYP S C + PI C G
Sbjct: 422 CQNGHVDIFECPSSLVFNDQ----SLICDYPQTSLKCLIEDTILIDETPIAAFDCS-TDG 476
Query: 457 IFGHETSCTRYWTCWNGTATEQLC 528
+F Y C G C
Sbjct: 477 LFSDGLCSATYHQCTAGQLINFTC 500
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 466 HETSCT-RYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGC 594
H C+ R +C NG C L++N+ + CD+P+ C
Sbjct: 411 HAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 61.7 bits (143), Expect = 6e-10
Identities = 51/203 (25%), Positives = 79/203 (38%), Gaps = 16/203 (7%)
Frame = +1
Query: 196 LTSCAQIE-DPCKTKARIVADDKYCDKYWECDNGQSVQYDCPNGLVFAGKHRGVTEGCDY 372
+ C+Q+ + C++ I + + + ++ C G + + +CP LVF CD+
Sbjct: 168 IDECSQVSGEYCESDGNI-SKSECSNVFFSCSEGIAHRRNCPANLVF----NPAISSCDW 222
Query: 373 PWRSNYCEYPKAQINPPIGTEHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNE 552
P N + + P ++C + G F + + C NG C GL+++E
Sbjct: 223 P--KNVMDCSEKSEKP----QNCGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSE 276
Query: 553 NAHSCDWPENVDGCQKHPL--------------CNEDPNGNVPLGKSCN-RYWQCQGGYP 687
CD+ NVD C C NG L C R CQ G
Sbjct: 277 KNQMCDYEWNVDECDLESSGFMENYKASEALTPCTNMDNGLYAL--DCTPRVLSCQNGRE 334
Query: 688 RLQRCPAMLVFDRRSLXCVVPPT 756
+ CP LVF+ SL C P T
Sbjct: 335 NIFECPPSLVFNENSLICDYPET 357
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Frame = +1
Query: 424 IGTEHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGC--- 594
+ E+C+ I E S +++C G A + C L++N SCDWP+NV C
Sbjct: 174 VSGEYCESDGNISKSECSNV-FFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEK 232
Query: 595 -QKHPLCNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXCVVP-PTEDCD 768
+K C E +G G+ + + C G P + CP L+F ++ C ++CD
Sbjct: 233 SEKPQNCGE-VDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECD 291
Query: 769 IPTT 780
+ ++
Sbjct: 292 LESS 295
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Frame = +1
Query: 454 GIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQK--HPLCNEDPN 627
G++ T + Y C +G+ C L+Y+ C W +D C + C D
Sbjct: 125 GVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMIDECSQVSGEYCESD-- 182
Query: 628 GNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXCVVPP-TEDC 765
GN+ + N ++ C G + CPA LVF+ C P DC
Sbjct: 183 GNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDC 229
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Frame = +1
Query: 283 CDNGQSVQYDCPNGLVFAGKHRGVTEGCDYPWRSNYCE---------YPKAQINPPIGTE 435
C NG + CP+GL+F+ K+ + CDY W + C+ Y ++ P T
Sbjct: 258 CTNGIPIVMFCPDGLMFSEKN----QMCDYEWNVDECDLESSGFMENYKASEALTPC-TN 312
Query: 436 HCDWLYGIFGHETSCT-RYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGC 594
+ LY + CT R +C NG C L++NEN+ CD+PE C
Sbjct: 313 MDNGLYAL-----DCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKC 361
Score = 33.9 bits (74), Expect(2) = 6e-04
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 484 RYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQKHPLCNE 618
R+ C +G A C L+Y++N CDW NV C + NE
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEEGEENE 85
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +1
Query: 610 CNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXC 741
C +G PLG R+ C G R CP LV+ + C
Sbjct: 25 CTNVGDGMYPLGACEPRFLACVSGEARYMDCPEDLVYHKNLEFC 68
Score = 27.1 bits (57), Expect(2) = 6e-04
Identities = 12/45 (26%), Positives = 18/45 (40%)
Frame = +1
Query: 607 LCNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXC 741
+C +G G + Y C G PR C L++D + C
Sbjct: 118 VCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKC 162
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 54.0 bits (124), Expect = 1e-07
Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 10/170 (5%)
Frame = +1
Query: 271 KYWECDNGQSVQYDCPNGLVFAGKH-----RGVTEGCDYPWRSNYCEYPKAQINPPIGTE 435
KY C G S C VF+ R C P + +Y + +
Sbjct: 1125 KYLRCSYGASKLQQCSEDRVFSNDKLECIVRESVSACTVPKNPSIKKYYTSNDQ----SA 1180
Query: 436 HCDWLY-GIFGHETSCTRYWTCWNGTATEQ-LCIGGLLYNENAHSCDWPENVDGCQKHPL 609
CD G++ +E C+ C+ G E C L +N+ CD+P+ V GC+ H
Sbjct: 1181 FCDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCENHGQ 1240
Query: 610 CNED--PNGN-VPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXCVVP 750
N + +G+ + +C +++C G + CP+ VF+ C P
Sbjct: 1241 TNGECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWP 1290
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Frame = +1
Query: 253 DDKYCDKYWECDNGQSVQY-DCPNGLVFAGKHRGVTEGCDYPWRSNYCEYPKAQINPPIG 429
+++ C +C G+ ++ C + L F +T CDYP + + CE Q N
Sbjct: 1192 NERDCSAILQCFGGELFEHPSCQSSLAF----NQLTGKCDYPQKVSGCEN-HGQTNGEC- 1245
Query: 430 TEHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGC 594
+EH ++ +C ++ C G C G ++N CDWP V C
Sbjct: 1246 SEHGSFI----ADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSC 1296
Score = 35.1 bits (77), Expect = 0.057
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = +1
Query: 211 QIEDPCKTKARIVADDKYCDKYWECDNGQSVQYDCPNGLVFAGKHRGVTEGCDYPWRSNY 390
Q C +AD C+ ++ C G+ V CP+G VF + CD+P
Sbjct: 1240 QTNGECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVF----NPLLSVCDWPSAVPS 1295
Query: 391 CEYPKAQINPPIGT 432
C + N G+
Sbjct: 1296 CSGQASDSNSSYGS 1309
Score = 34.7 bits (76), Expect = 0.075
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 25/158 (15%)
Frame = +1
Query: 199 TSCAQIEDPCKTKARIVADDKYCDKYWECDNGQSVQYDCPNGLVFAGKHRGVTEGCDYP- 375
TS A I D C A + KY +C NG ++ C L F + T + P
Sbjct: 683 TSAAPIGDRCSLDASGLFSLGCSQKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPE 742
Query: 376 ------------------WRSNYCEYPKAQI----NPPIGTEHCDWLY-GIFGHETSCT- 483
SNY P + P+G + C ++ G+F + C+
Sbjct: 743 CGSQGSTSSPVITTPGQDQSSNYYGIPSDDVPSTTQTPVG-DRCAYVASGLF--DLGCSQ 799
Query: 484 RYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQ 597
+Y C + A+ + C G L ++E + SC + + V CQ
Sbjct: 800 KYIQCSDSAASVRECEGSLYFDERSQSCRFRDEVFKCQ 837
Score = 32.7 bits (71), Expect = 0.30
Identities = 35/139 (25%), Positives = 50/139 (35%), Gaps = 10/139 (7%)
Frame = +1
Query: 382 SNYCEYPKAQINPPIGTEHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNEN-- 555
SN +YP + P TE + G Y C NG C ++ E+
Sbjct: 17 SNSIQYPHS----PAATECPAYFNGNIAGNACSREYSICVNGVRQAATCSDDSVFYEDEC 72
Query: 556 -----AHSCDWPENV---DGCQKHPLCNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAM 711
+ C EN D C +G +G S N++ C G + +CP
Sbjct: 73 VPVDESPECRVDENTEEDDTPYAEFDCTSKQDGIYSIGCS-NQFISCVAGGAYMAKCPDS 131
Query: 712 LVFDRRSLXCVVPPTEDCD 768
LVF+ R+ C E CD
Sbjct: 132 LVFNERTQDC----RESCD 146
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 640 LGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXCVV-PPTEDCDIP 774
+G ++Y +C G +LQ+C VF L C+V C +P
Sbjct: 1119 IGVCSSKYLRCSYGASKLQQCSEDRVFSNDKLECIVRESVSACTVP 1164
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 610 CNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXC 741
C+ D +G LG S +Y QC G ++RC L F+ + C
Sbjct: 692 CSLDASGLFSLGCS-QKYIQCSNGAAIVRRCGESLYFNEATQEC 734
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 487 YWTCWNGTATEQLCIGGLLYNENAHSCDWPENVD 588
+++C N ++ C G ++N N SCD+ D
Sbjct: 209 FYSCSNNMVFQRYCPPGTVFNINQQSCDFQCTTD 242
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Frame = +1
Query: 454 GIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQKHPLCNEDPNGN 633
GI+ Y C G + C GL YNE C + VD C K ++ + N
Sbjct: 895 GIYALPYCSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTC-KIGKGSDIIDSN 953
Query: 634 VPLGKS-------CNRYW-QCQGGYPRLQRCPAMLVFDRRSLXCVVP-PTEDCDIPTT 780
GKS C+ Y+ C R CP L F + S CV P ++C I TT
Sbjct: 954 ACFGKSDGYYSAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATT 1011
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +1
Query: 274 YWECDNGQSVQYDCPNGLVFAGKHRGVTEGCDYPWRSNYCEYPKA--QINPPIGTEHCDW 447
Y+ C + Q + CPN L F+ + +E C +P + C + P + ++ C
Sbjct: 971 YFSCIDEQIRKMSCPNSLKFSKE----SEKCVFPIDAKECSIATTLDRTPPAVPSDFCTI 1026
Query: 448 LYGIFGHETSCT-RYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGC 594
H C+ Y C NG A CI L+YN + +C++ C
Sbjct: 1027 RSNGLHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKDC 1076
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 460 FGHETSCTRY-WTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQKH 603
F C+ Y W C NG + C L+Y + + CD+PE+V C ++
Sbjct: 211 FTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDCPEY 259
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 478 CTRYWT-CWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQKH-PLCNEDPNGNVPL 642
C +Y C+N + C GL Y+ CD ENV+GC ++ P + P P+
Sbjct: 701 CEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVEGCPEYKPTTDATPAAEQPV 757
Score = 34.7 bits (76), Expect = 0.075
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 475 SCTR-YWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQKH 603
+CT+ ++TC +G A C G L++N+ +CD+ EN C+K+
Sbjct: 445 ACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAEN---CEKN 485
Score = 32.3 bits (70), Expect = 0.40
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 487 YWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQ 597
++ C NG C L++N CD+ NV CQ
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNVRDCQ 627
Score = 29.1 bits (62), Expect = 3.7
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 24/133 (18%)
Frame = +1
Query: 415 NPPIGTEHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDW------- 573
NP + + C GIFG + + +C NG C L+++ +C++
Sbjct: 346 NPAVHGD-CKNRDGIFGIKECHASFLSCDNGVGRVIQCADNLVFDTRVSACEFAAICLEP 404
Query: 574 --PENVDGCQKH-------PL-------CNEDPNGNVPLGKSCNR-YWQCQGGYPRLQRC 702
PE+V H P C PNG + ++C + ++ C G C
Sbjct: 405 RKPEDVPVLYNHGGAYNERPAEVKVDFDCTGKPNGKY-IKEACTKSFFTCHDGRAFANDC 463
Query: 703 PAMLVFDRRSLXC 741
P LVF++ + C
Sbjct: 464 PGDLVFNKATGTC 476
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 253 DDKYCDKY-WECDNGQSVQYDCPNGLVF 333
D+ C Y W+C NG+ + CP L++
Sbjct: 213 DNVKCSPYFWQCSNGKLFRKTCPEKLIY 240
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +1
Query: 598 KHPLCNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXC 741
K P C D +G +G S ++Y QC Q CP L FDR C
Sbjct: 39 KGPPC-PDGDGLYAVGCS-SKYLQCVNNVEYEQSCPEGLYFDRLLARC 84
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 610 CNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXC 741
C+ +G +G ++ C GG R+ CPA L++D R + C
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVAC 104
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 610 CNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXC 741
C+ +G +G ++ C GG R+ CPA L++D R + C
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVAC 104
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/66 (28%), Positives = 25/66 (37%)
Frame = +1
Query: 544 YNENAHSCDWPENVDGCQKHPLCNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFD 723
Y A + D P K C +G G+ + Y C GY +CPA L FD
Sbjct: 194 YTTGAPAADEPVTRSAVTKS--CVGKADGFYSFGECSDHYTACSNGYLIPMQCPARLAFD 251
Query: 724 RRSLXC 741
+ C
Sbjct: 252 EARVIC 257
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 610 CNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLXC 741
C+ +G +G ++ C GG R+ CPA L++D R + C
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVAC 104
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/66 (28%), Positives = 25/66 (37%)
Frame = +1
Query: 544 YNENAHSCDWPENVDGCQKHPLCNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFD 723
Y A + D P K C +G G+ + Y C GY +CPA L FD
Sbjct: 194 YTTGAPAADEPVTRSAVTKS--CVGKADGFYSFGECSDHYTACSNGYLIPMQCPARLAFD 251
Query: 724 RRSLXC 741
+ C
Sbjct: 252 EARVIC 257
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -3
Query: 620 SSLQRGCF*QPSTFSGQSQEWAFSLYKSPPMQ-SCSVAVPFQQVQYLVQ 477
S +Q C Q +T Q Q+++ S + P+Q SCS A P QQV Y VQ
Sbjct: 33 SQVQPSCSCQQAT---QPQQYSCSCQNTAPVQTSCSCAQPVQQVTYQVQ 78
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -3
Query: 620 SSLQRGCF*QPSTFSGQSQEWAFSLYKSPPMQ-SCSVAVPFQQVQYLVQ 477
S +Q C Q +T Q Q+++ S + P+Q SCS A P QQV Y VQ
Sbjct: 34 SQVQPSCSCQQAT---QPQQYSCSCQNTAPVQTSCSCAQPVQQVTYQVQ 79
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 454 GIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWPE 579
G FG + C ++ C NG + C GL ++ + CD P+
Sbjct: 570 GFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPD 611
Score = 31.9 bits (69), Expect = 0.53
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 265 CDKYWECDNGQSVQYDCPNGLVF 333
C K+ C NG S ++CPNGL F
Sbjct: 578 CLKFIRCVNGISYNFECPNGLSF 600
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 31.5 bits (68), Expect = 0.70
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +1
Query: 196 LTSCAQIEDPCKTKARIVADDKYCDKYWECDNGQSVQYDCPNG-LVFAGKHRGVTEGCDY 372
+ C+ + C +K + + K C+ ECDNG + DCP L + R T C
Sbjct: 1010 IVKCSVSQFQC-SKTKCIIKSKRCNGVQECDNGAD-EEDCPRSKLCDPDEFRCGTGLCIK 1067
Query: 373 PWRSNYCEYPKAQINPPIGTEHCDWLYGIFGHETSCT--RYWTCWNGTAT 516
+S C+ K Q + EHC+ E C R + C NG +T
Sbjct: 1068 --QSQVCD-GKMQCLDGLDEEHCN-------EEEKCLQGRQFRCANGKST 1107
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -3
Query: 614 LQRGCF*QPSTFSGQSQEWAFSLYKSPPMQ-SCSVAVPFQQVQYLVQEVSWPKIPYSQSQ 438
+Q C Q + ++ Q QE + S + P+Q SCS A P QQ YLV P Q
Sbjct: 35 VQPSCSCQQTPYT-QPQETSCSCQNTAPVQTSCSCAQPVQQQTYLVPTSQC--APACQQS 91
Query: 437 CSV 429
C +
Sbjct: 92 CQI 94
>U80437-8|AAB37623.1| 630|Caenorhabditis elegans Exocyst component
protein 7 protein.
Length = 630
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/59 (23%), Positives = 32/59 (54%)
Frame = -2
Query: 417 IYLSLRVLAVI*PPRVIAALSHPSMFARKNKSIGAVVLYRLSVVTFPILVAVFVIGHYS 241
+ ++ VLA+ P L P +FAR ++G+++ + ++ P L +F++ +Y+
Sbjct: 427 VTVTQHVLALTAPQGSNTNLLLPKLFARILSALGSMLKKKANLYDDPTLATIFLLNNYN 485
>U58764-1|AAB00723.2| 191|Caenorhabditis elegans Hypothetical
protein M03E7.4 protein.
Length = 191
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 193 NLTSCAQIEDPCKTKARIVADDKYCDKYWECDNGQSVQYDC 315
N C E CK + ++ D+ C+ ECD+G + DC
Sbjct: 151 NCPLCTAGEFACKVSEQCISLDRRCNGLIECDDGTD-ERDC 190
>AC084153-13|AAK84583.1| 123|Caenorhabditis elegans Hypothetical
protein Y22D7AL.1 protein.
Length = 123
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 288 VTFPILVAVFVIGHYSSFGLA 226
V I+V VF+IG+YS +G+A
Sbjct: 84 VLLKIVVIVFIIGYYSKYGVA 104
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 27.9 bits (59), Expect = 8.7
Identities = 34/141 (24%), Positives = 51/141 (36%)
Frame = +1
Query: 250 ADDKYCDKYWECDNGQSVQYDCPNGLVFAGKHRGVTEGCDYPWRSNYCEYPKAQINPPIG 429
AD+K C EC S+Q+ C N + + + CD W CE + G
Sbjct: 406 ADEKKCTPVKECVVESSIQFTCDNKCLESSRR------CDGVWD---CE----DKSDEKG 452
Query: 430 TEHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQKHPL 609
+ C + C + T NG A C G + H C E + +
Sbjct: 453 CDKCPSRSFKCSADKKCLPFHTRCNGVAE---CSDG----SDEHKCSCQECLGTHHDTYM 505
Query: 610 CNEDPNGNVPLGKSCNRYWQC 672
C+E N + G+ C+ Y C
Sbjct: 506 CSES-NRCLKRGEVCSPYSMC 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,888,082
Number of Sequences: 27780
Number of extensions: 413052
Number of successful extensions: 1303
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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