Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_F08
         (875 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    32   0.020
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    26   1.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.2  

>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 32.3 bits (70), Expect = 0.020
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
 Frame = +2

Query: 245 KMTKPRTRRQSRRQSEYFEPTEDDS-SPPPTASGNISVNDMVAMMSTWQRNQEETFE-KL 418
           +M++ R+R Q++R S+  E T   S SP P    ++    +    S   R+     E + 
Sbjct: 349 RMSRGRSRSQTKRYSQTVESTNAPSRSPGPDEEPSV-YKSLAEAASKMARSFIPAREPED 407

Query: 419 LHTVLNQSHRSSPPPAQPALGNFASCKARYSGAPDESLDGFIDAVE 556
           LHT  ++S      P+QP      S +      P +  +G  ++ E
Sbjct: 408 LHTTTHKSPEREDNPSQPYEAYLESVRRSKKSFPHKDAEGVTESAE 453


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
 Frame = +3

Query: 288 PSISNRQRTILPRRRLHRETFPSTTWLP*CLRGNATKRKR--LRNFYIQFSTNRTG-HRR 458
           P  S ++R+I+P   +H             LR NA +R    ++   + F+    G H++
Sbjct: 199 PGHSRQRRSIVPAVPVHEHVR---------LRRNAAERHDSWVQKQPLLFTYTDDGRHKQ 249

Query: 459 RPLNLHLETSPRARLATAERQTNHLTDL 542
           RP+   + ++ RAR A+A+R +    +L
Sbjct: 250 RPIRDAISSANRARRASAKRSSRRKNEL 277


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 263 TRRQSRRQSEYFEPTEDDSSPPPT 334
           +R      S Y+ PTEDD    PT
Sbjct: 746 SRASDHGVSVYYFPTEDDDEDGPT 769


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 907,719
Number of Sequences: 2352
Number of extensions: 18895
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)