Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_F08
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z47808-4|CAA87772.1|  235|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AF098997-2|AAC68722.2|  796|Caenorhabditis elegans Hypothetical ...    30   2.5  
U40945-6|AAS80346.1|  437|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
            T25C12.3 protein.
          Length = 2103

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 377  STWQRNQEETFEKLLHTVLNQSHRSSPPPAQPALGNFASC-KARY 508
            + W  N + T     H V+N + +  P     A  NFA+C K RY
Sbjct: 1208 TNWAPNVDPTNPAYNHAVINSNGKWEPADPNDAANNFAACMKHRY 1252


>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
            T25C12.3 protein.
          Length = 2103

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 377  STWQRNQEETFEKLLHTVLNQSHRSSPPPAQPALGNFASC-KARY 508
            + W  N + T     H V+N + +  P     A  NFA+C K RY
Sbjct: 1208 TNWAPNVDPTNPAYNHAVINSNGKWEPADPNDAANNFAACMKHRY 1252


>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
            T25C12.3 protein.
          Length = 2103

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 377  STWQRNQEETFEKLLHTVLNQSHRSSPPPAQPALGNFASC-KARY 508
            + W  N + T     H V+N + +  P     A  NFA+C K RY
Sbjct: 1208 TNWAPNVDPTNPAYNHAVINSNGKWEPADPNDAANNFAACMKHRY 1252


>Z47808-4|CAA87772.1|  235|Caenorhabditis elegans Hypothetical
           protein D2013.6 protein.
          Length = 235

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +2

Query: 449 SSPPPAQPALGNFASCK-ARYSGAPDESLDGFIDAVEAYKECANVS 583
           ++PP   P +G+F S   A Y  +PD+  +GF    +++ +  N S
Sbjct: 139 NAPPAYSPPIGDFYSAPPAYYQPSPDQGPNGFNPTTDSFPDQPNPS 184


>AF098997-2|AAC68722.2|  796|Caenorhabditis elegans Hypothetical
           protein T10D4.6 protein.
          Length = 796

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 251 TKPRTRRQSRRQSEYFEPTEDDSSPPPTASGNIS 352
           T+ R   +    S    PT D SSPPP AS + S
Sbjct: 599 TEKRATEERSESSRSLPPTVDVSSPPPVASSSCS 632


>U40945-6|AAS80346.1|  437|Caenorhabditis elegans Hypothetical
           protein F10D7.5c protein.
          Length = 437

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = +2

Query: 287 SEYFEPTEDDSSPPPTASGNISVNDMVAMMSTWQRNQEETFEKLLHTVLNQSHRSSPPPA 466
           S Y  P     +PPP     + VN   ++  +       T    +  +L +   S+PPP 
Sbjct: 268 SSYLAPAVPARAPPPVPQSPLRVNVRDSLEGSSSTPALSTTRPTIDDLLGEIIPSTPPPV 327

Query: 467 QP--ALGNFAS 493
            P   LG+ +S
Sbjct: 328 APRAVLGSSSS 338


>U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical
           protein F10D7.5a protein.
          Length = 617

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = +2

Query: 287 SEYFEPTEDDSSPPPTASGNISVNDMVAMMSTWQRNQEETFEKLLHTVLNQSHRSSPPPA 466
           S Y  P     +PPP     + VN   ++  +       T    +  +L +   S+PPP 
Sbjct: 448 SSYLAPAVPARAPPPVPQSPLRVNVRDSLEGSSSTPALSTTRPTIDDLLGEIIPSTPPPV 507

Query: 467 QP--ALGNFAS 493
            P   LG+ +S
Sbjct: 508 APRAVLGSSSS 518


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,073,971
Number of Sequences: 27780
Number of extensions: 419773
Number of successful extensions: 1414
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1413
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)