Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_F06
         (721 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    26   1.4  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   4.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   5.4  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
 Frame = +3

Query: 378 PIAETTPSVQAKTPVKRKATDEKYAPSTSGQHTVHTSISQQVTLNMLNA-PEPE---MEV 545
           P   T PS        R AT    A  ++ +    +     + L M+   PE E   +E+
Sbjct: 563 PAVATPPSTSRARTATRTATTTTRALRSAKKEPAESLDMDGINLVMVTGEPEDEKHEIEI 622

Query: 546 ESLGGDVKLEFEPSTEEI 599
           E  G D   EF  STE++
Sbjct: 623 EHQGADSGDEFILSTEDL 640


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +1

Query: 394 HQVCR--RKPQ*SERLQMKN-MHQAHRVNTQSTHLFHNKL 504
           HQV    ++ Q  +R ++K  +HQ  + N   TH++  KL
Sbjct: 15  HQVLNPNQRQQLEDRRRIKEQLHQLEQDNESPTHMYRRKL 54


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 294 NSAAKVGEIFTEAGAAFNKLAEMIML--LHPIAETTPSVQ 407
           ++ A+V  I+T+  AAF+ L   I+L  L  +   +P VQ
Sbjct: 675 DAGAQVDAIYTDLKAAFDSLPHAILLAKLDKLGIPSPLVQ 714


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,520
Number of Sequences: 2352
Number of extensions: 14508
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)