Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F06
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical ... 35 0.051
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 29 4.4
L15313-1|AAA28202.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 5.8
U29535-3|AAK31458.1| 556|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 5.8
Z71258-12|CAJ30220.1| 555|Caenorhabditis elegans Hypothetical p... 28 7.7
Z71258-8|CAD30427.1| 553|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z71258-7|CAA95782.2| 588|Caenorhabditis elegans Hypothetical pr... 28 7.7
U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily ass... 28 7.7
U51136-1|AAA96057.1| 553|Caenorhabditis elegans CHR3 protein. 28 7.7
U28742-3|AAA68333.3| 837|Caenorhabditis elegans Hypothetical pr... 28 7.7
U13075-1|AAA96983.1| 553|Caenorhabditis elegans steroid hormone... 28 7.7
DQ407523-1|ABD85015.1| 856|Caenorhabditis elegans OGA-1c protein. 28 7.7
DQ407522-1|ABD85014.1| 854|Caenorhabditis elegans OGA-1b protein. 28 7.7
DQ407521-1|ABD85013.1| 870|Caenorhabditis elegans OGA-1d protein. 28 7.7
AF332203-1|AAK17974.1| 588|Caenorhabditis elegans nuclear recep... 28 7.7
AF332202-1|AAK17973.1| 573|Caenorhabditis elegans nuclear recep... 28 7.7
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 28 7.7
>AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical
protein Y43F8C.6 protein.
Length = 422
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 294 NSAAKVGEIFTEAGAAFNKLAEMIMLLHPIAETTPS 401
N AAKV E+F AG AF KL ++ + LH + S
Sbjct: 151 NLAAKVAEVFLTAGHAFQKLGDLTLQLHTTTDADES 186
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 384 AETTPSVQAKTPVKRKATDEKYAPSTSGQHTVHTSISQQVTL---NMLNAPEPEMEVESL 554
A P+V+ TP A +E AP+TS + + + + T + APE +S
Sbjct: 256 AVAEPAVE--TPAPAPAAEETPAPATSSEEAPAPAPTAEETPAPETVSAAPEAANSYDSA 313
Query: 555 GGDVKLEFEPSTE 593
GGD PS+E
Sbjct: 314 GGDAATAPAPSSE 326
>L15313-1|AAA28202.1| 305|Caenorhabditis elegans Hypothetical
protein ZK353.4 protein.
Length = 305
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Frame = +3
Query: 291 NNSAAKVGEIFTEAGAAFNKLAEMIMLLHP-IAETTPSVQAKTPVKRKATDEKYAPSTSG 467
++SA + GEI E + +K + ++ H I E T +VQA TP K ++ E S+ G
Sbjct: 176 SSSANRTGEISVEIVSP-SKYFQCLLPTHNLIPEPTTAVQASTPEKPMSSAESAMESSIG 234
Query: 468 Q----HTVHTSISQQVTLNMLNA 524
+ V + S+ NM+ A
Sbjct: 235 SDISTYIVSSKRSEVNNYNMIEA 257
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 471 HTVHTSISQQVTLNMLNAPEPEMEVESLGGDVKL 572
HTV +I +QVTL L P E+E G+V L
Sbjct: 800 HTVRVNIERQVTLQCLAVGIPPPEIEWQKGNVLL 833
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 471 HTVHTSISQQVTLNMLNAPEPEMEVESLGGDVKL 572
HTV +I +QVTL L P E+E G+V L
Sbjct: 800 HTVRVNIERQVTLQCLAVGIPPPEIEWQKGNVLL 833
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 471 HTVHTSISQQVTLNMLNAPEPEMEVESLGGDVKL 572
HTV +I +QVTL L P E+E G+V L
Sbjct: 800 HTVRVNIERQVTLQCLAVGIPPPEIEWQKGNVLL 833
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 471 HTVHTSISQQVTLNMLNAPEPEMEVESLGGDVKL 572
HTV +I +QVTL L P E+E G+V L
Sbjct: 800 HTVRVNIERQVTLQCLAVGIPPPEIEWQKGNVLL 833
>U29535-3|AAK31458.1| 556|Caenorhabditis elegans Hypothetical
protein C25H3.6a protein.
Length = 556
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 366 MLLHPIAE-TTPSVQAKTPVKRKATDEKYAPSTSGQHTVHTSISQQVT 506
+L H A +T + K KRKA DE APS T ++S +T
Sbjct: 178 LLKHATASLSTKPITPKENGKRKAVDEAAAPSIKRTKTAAAALSVSIT 225
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 471 HTVHTSISQQVTLNMLNAPEPEMEVESLGGDVKL 572
HTV +I +QVTL L P E+E G+V L
Sbjct: 800 HTVRVNIERQVTLQCLAVGIPPPEIEWQKGNVLL 833
>Z71258-12|CAJ30220.1| 555|Caenorhabditis elegans Hypothetical
protein C01H6.5f protein.
Length = 555
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 336 AAFNKLAEMIMLLHPIAETTPSVQAKTPVKRKATDEKYAPSTSGQHTVHTSISQ 497
A KLA+ LH + PS+ +TP K K DE S++ HT S+
Sbjct: 3 AVEQKLADATRTLHAKSSLQPSLSIETP-KSKENDESGCESSNCMFHPHTIKSE 55
>Z71258-8|CAD30427.1| 553|Caenorhabditis elegans Hypothetical
protein C01H6.5b protein.
Length = 553
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 336 AAFNKLAEMIMLLHPIAETTPSVQAKTPVKRKATDEKYAPSTSGQHTVHTSISQ 497
A KLA+ LH + PS+ +TP K K DE S++ HT S+
Sbjct: 3 AVEQKLADATRTLHAKSSLQPSLSIETP-KSKENDESGCESSNCMFHPHTIKSE 55
>Z71258-7|CAA95782.2| 588|Caenorhabditis elegans Hypothetical
protein C01H6.5a protein.
Length = 588
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 336 AAFNKLAEMIMLLHPIAETTPSVQAKTPVKRKATDEKYAPSTSGQHTVHTSISQ 497
A KLA+ LH + PS+ +TP K K DE S++ HT S+
Sbjct: 38 AVEQKLADATRTLHAKSSLQPSLSIETP-KSKENDESGCESSNCMFHPHTIKSE 90
>U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform b protein.
Length = 638
Score = 27.9 bits (59), Expect = 7.7
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +3
Query: 288 MNNSAAKVGEIFTEAGAAFNKLAEM-IMLLHPIAETTPSVQAKTPVKRKATDEKYAPSTS 464
+N ++G+I + A ++L ++ + P+ TP ++K + D K PS S
Sbjct: 165 LNLIEERIGDIRRMSLAKRDQLTKLHLQKPPPVQVVTPEKKSKKNSSKNELDSKDVPSCS 224
Query: 465 GQHTVHTSIS-QQVTLNMLNAPEPEMEVE-SLGGDVK 569
G+ T ++S ++ T + NA + + E S D+K
Sbjct: 225 GESTPAGTLSPRRETREVTNAFDEMIATEISYVADLK 261
>U51136-1|AAA96057.1| 553|Caenorhabditis elegans CHR3 protein.
Length = 553
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 336 AAFNKLAEMIMLLHPIAETTPSVQAKTPVKRKATDEKYAPSTSGQHTVHTSISQ 497
A KLA+ LH + PS+ +TP K K DE S++ HT S+
Sbjct: 3 AVEQKLADATRTLHAKSSLQPSLSIETP-KSKENDESGCESSNCMFHPHTIKSE 55
>U28742-3|AAA68333.3| 837|Caenorhabditis elegans Hypothetical
protein T20B5.3 protein.
Length = 837
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 435 TDEKYAPSTSGQHTVHTSISQQVTLNMLNAPEPEMEVESLGGDV 566
T+ Y P S + V T I + +T ++ NAP+P + G V
Sbjct: 316 TETIYVPEVSLVNAVSTWIDEFITPSVTNAPQPPQLTADVAGYV 359
>U13075-1|AAA96983.1| 553|Caenorhabditis elegans steroid hormone
receptor familymember CHR3 protein.
Length = 553
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 336 AAFNKLAEMIMLLHPIAETTPSVQAKTPVKRKATDEKYAPSTSGQHTVHTSISQ 497
A KLA+ LH + PS+ +TP K K DE S++ HT S+
Sbjct: 3 AVEQKLADATRTLHAKSSLQPSLSIETP-KSKENDESGCESSNCMFHPHTIKSE 55
>DQ407523-1|ABD85015.1| 856|Caenorhabditis elegans OGA-1c protein.
Length = 856
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 435 TDEKYAPSTSGQHTVHTSISQQVTLNMLNAPEPEMEVESLGGDV 566
T+ Y P S + V T I + +T ++ NAP+P + G V
Sbjct: 316 TETIYVPEVSLVNAVSTWIDEFITPSVTNAPQPPQLTADVAGYV 359
>DQ407522-1|ABD85014.1| 854|Caenorhabditis elegans OGA-1b protein.
Length = 854
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 435 TDEKYAPSTSGQHTVHTSISQQVTLNMLNAPEPEMEVESLGGDV 566
T+ Y P S + V T I + +T ++ NAP+P + G V
Sbjct: 316 TETIYVPEVSLVNAVSTWIDEFITPSVTNAPQPPQLTADVAGYV 359
>DQ407521-1|ABD85013.1| 870|Caenorhabditis elegans OGA-1d protein.
Length = 870
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 435 TDEKYAPSTSGQHTVHTSISQQVTLNMLNAPEPEMEVESLGGDV 566
T+ Y P S + V T I + +T ++ NAP+P + G V
Sbjct: 332 TETIYVPEVSLVNAVSTWIDEFITPSVTNAPQPPQLTADVAGYV 375
>AF332203-1|AAK17974.1| 588|Caenorhabditis elegans nuclear receptor
NHR-23 protein.
Length = 588
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 336 AAFNKLAEMIMLLHPIAETTPSVQAKTPVKRKATDEKYAPSTSGQHTVHTSISQ 497
A KLA+ LH + PS+ +TP K K DE S++ HT S+
Sbjct: 38 AVEQKLADATRTLHAKSSLQPSLSIETP-KSKENDESGCESSNCMFHPHTIKSE 90
>AF332202-1|AAK17973.1| 573|Caenorhabditis elegans nuclear receptor
NHR-23 protein.
Length = 573
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 336 AAFNKLAEMIMLLHPIAETTPSVQAKTPVKRKATDEKYAPSTSGQHTVHTSISQ 497
A KLA+ LH + PS+ +TP K K DE S++ HT S+
Sbjct: 23 AVEQKLADATRTLHAKSSLQPSLSIETP-KSKENDESGCESSNCMFHPHTIKSE 75
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 384 AETTPSVQAKTPV--KRKATDEKYAPSTSGQHTVHTSISQQVTLNMLNAPEPEMEVESLG 557
A+++PSV+ ++PV +++ +K + TS+ Q + ++ + +PE S
Sbjct: 194 ADSSPSVRNRSPVPVEKEKKQKKPRGGKKKEAEASTSVPQASSPDISSQEQPESSTSSSK 253
Query: 558 GDVKLEFEPS 587
K E EPS
Sbjct: 254 KPSKKEKEPS 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,975,491
Number of Sequences: 27780
Number of extensions: 309588
Number of successful extensions: 812
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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