Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F05
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0261 + 27243898-27243938,27244068-27244157,27244293-272443... 47 2e-05
01_06_0175 + 27229878-27230056,27231102-27231159,27231230-272312... 46 4e-05
01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449... 45 7e-05
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 43 3e-04
05_01_0562 + 4907937-4907990,4908890-4909075,4909180-4909285,490... 43 3e-04
02_03_0176 + 16010806-16011095,16011983-16012061,16012389-160124... 43 3e-04
08_01_0008 - 65366-65497,65588-65759,65846-65972,66058-66140,662... 40 0.002
04_04_0814 + 28266590-28266615,28266780-28266860,28266986-282670... 38 0.008
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 36 0.033
09_06_0203 + 21555747-21555805,21555862-21555939,21556034-215560... 35 0.099
04_04_0224 - 23738105-23738273,23738364-23738472,23738702-237388... 33 0.23
12_02_0827 + 23492583-23492633,23493018-23493566,23493722-23494012 32 0.70
04_04_0223 - 23723055-23723223,23723316-23723424,23723588-237236... 32 0.70
03_02_0382 - 7958634-7959272,7959358-7959583,7959725-7959810,795... 32 0.70
03_01_0185 - 1485023-1485733 30 2.8
06_01_0363 - 2588356-2588532,2588612-2588737,2588811-2588888,258... 29 3.7
06_01_0326 + 2372176-2373057,2373146-2373610 29 6.5
04_04_0887 + 29095087-29096166 28 8.6
01_06_0626 + 30701538-30701939 28 8.6
01_05_0743 + 24835349-24836009,24836925-24837068,24837154-248373... 28 8.6
>02_05_0261 +
27243898-27243938,27244068-27244157,27244293-27244350,
27244441-27244485,27244778-27244855,27244940-27245041,
27245150-27245173
Length = 145
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 650 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQD 829
KP+ +A+ F+ R+E++ +PD + AA SK E+W MSE+EK + + A Q
Sbjct: 32 KPKRPPSAFFVFMSEFRQEYQAAHPDNKSV-AAVSKAAGEKWRAMSEQEKAPYVDKAGQK 90
Query: 830 KHRFDLEMQNY 862
K ++ N+
Sbjct: 91 KQDYEKTKANF 101
>01_06_0175 +
27229878-27230056,27231102-27231159,27231230-27231274,
27232711-27232791,27232884-27232922
Length = 133
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/76 (23%), Positives = 45/76 (59%)
Frame = +2
Query: 650 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQD 829
+P+ TA+ +F++ R+ +K++ P V + K C E+WNTM+ +E+ +++++A +
Sbjct: 48 RPKKPPTAFFYFMEDFRKTYKEENPSVKSM-QEVGKACGEKWNTMTFEERVKYYDIATEK 106
Query: 830 KHRFDLEMQNYVPPKD 877
+ ++ + + K+
Sbjct: 107 RAEYEKAVAEFDKKKE 122
>01_01_0605 +
4497308-4497472,4497719-4497904,4498898-4499003,
4499062-4499216,4499341-4499424,4499498-4499589,
4499729-4499837,4499944-4500030,4500153-4500245,
4501144-4501341,4501481-4501632,4501724-4501874,
4501975-4502073,4502159-4502326,4502624-4502702,
4502870-4503000
Length = 684
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +2
Query: 614 NKARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEK 793
+K + + + N P+ MT + +F R K PD+ +KK E W M+ +
Sbjct: 586 DKRKPKKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPT--TEIAKKLGEMWQKMTGE 643
Query: 794 EKQRFHEMAEQDKHRFDLEMQNY 862
EKQ + + ++ DK R++ E Y
Sbjct: 644 EKQPYIQQSQVDKKRYEKESAVY 666
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +2
Query: 617 KARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE 796
+ R R R +PR +AY FF + E K +P +S+ + WN ++ +
Sbjct: 215 RRRGRRQRDPAQPRPNRSAYNFFFKEKHPELKATHPHRE---REYSRMIGDAWNRLAADD 271
Query: 797 KQRFHEMAEQDKHRFDLEMQNY 862
K ++ + +DK R+ EMQ Y
Sbjct: 272 KMVYYRHSAEDKERYKREMQEY 293
>05_01_0562 +
4907937-4907990,4908890-4909075,4909180-4909285,
4909377-4909513,4909989-4910072,4910157-4910248,
4910358-4910466,4910554-4910640,4910737-4910829,
4911384-4911581,4911659-4911810,4911910-4912060,
4912174-4912272,4912362-4912535,4912680-4912758,
4912858-4912979
Length = 640
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/82 (26%), Positives = 40/82 (48%)
Frame = +2
Query: 617 KARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE 796
K + + + N P+ + + +F + R K P+++ +KK ERW M+ +E
Sbjct: 546 KRKPKKKKDPNAPKRAIAPFMYFSKAERANLKNSNPELAT--TEIAKKLGERWQKMTAEE 603
Query: 797 KQRFHEMAEQDKHRFDLEMQNY 862
KQ + E ++ DK R+ E Y
Sbjct: 604 KQPYVEQSQVDKKRYAEESAAY 625
>02_03_0176 +
16010806-16011095,16011983-16012061,16012389-16012464,
16012541-16012630,16012878-16013031,16013172-16013181,
16013240-16013407,16014087-16014485,16014580-16014990
Length = 558
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 647 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQ 826
N P+ + Y FF Q ++H+K P+ SK ERWN + ++K + E +
Sbjct: 374 NHPKPNRSGYNFFFQ---DQHRKLKPEYPGQDRLISKMIGERWNNLGPEDKAVYQEKGVE 430
Query: 827 DKHRFDLEMQNY 862
DK R+ ++ Y
Sbjct: 431 DKARYQRQLALY 442
>08_01_0008 -
65366-65497,65588-65759,65846-65972,66058-66140,
66232-66329
Length = 203
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/58 (31%), Positives = 37/58 (63%)
Frame = +2
Query: 668 TAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRF 841
TA+ F+ R+E+K ++PD + +A +K+ ERW +MS+++K+ + + A + K +
Sbjct: 97 TAFFLFMSDFRKEYKAEHPDNKSV-SAVAKEGGERWKSMSDEDKKPYLDKAAELKAEY 153
>04_04_0814 +
28266590-28266615,28266780-28266860,28266986-28267043,
28267143-28267187,28268653-28268721,28268821-28268931,
28269038-28269046
Length = 132
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +2
Query: 650 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 808
KP+ +T + F+ R ++ +K+P+ + AA +K E+W MS++EK ++
Sbjct: 24 KPKRGLTPFFAFLAEFRPQYMEKHPNTKGV-AAVTKAAGEKWRAMSDEEKAQY 75
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 36.3 bits (80), Expect = 0.033
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 647 NKPRGRMTAYAFFVQTCREE---HKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEM 817
+KP+ M+AY + Q R KK P++ I E W MSE EK F
Sbjct: 283 SKPKQPMSAYFVYTQQRRAALVAEKKNVPEIGRI-------TGEEWKAMSEAEKAPFEAA 335
Query: 818 AEQDKHRFDLEMQNY 862
A + + + +EM Y
Sbjct: 336 ARKQREEYQVEMAAY 350
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 671 AYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRF 841
AY + + E KK+ PD F S +W + +EKQ + E Q+K +
Sbjct: 163 AYVLWCKDQWNEIKKESPDAD--FKEVSNALGAKWKALGAEEKQPYEERYRQEKEAY 217
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/72 (19%), Positives = 35/72 (48%)
Frame = +2
Query: 647 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQ 826
N+P+ +++ F + R + ++ P V+ + + + +W + E EKQ ++ A +
Sbjct: 412 NRPKKPASSFLLFSKEARRQLAEERPGVAS--STLTALVSVKWKELGEAEKQAWNGKAAE 469
Query: 827 DKHRFDLEMQNY 862
+ +M+ Y
Sbjct: 470 AMAAYKRDMEEY 481
>09_06_0203 +
21555747-21555805,21555862-21555939,21556034-21556091,
21556191-21556235,21556514-21556549,21556855-21556935,
21557016-21557087,21557184-21557195
Length = 146
Score = 34.7 bits (76), Expect = 0.099
Identities = 13/48 (27%), Positives = 31/48 (64%)
Frame = +2
Query: 647 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSE 790
NKP+ +A+ F++ R+++K+K+P+V + + K ++W +M++
Sbjct: 33 NKPKRPPSAFFVFMEQFRKDYKEKHPNVKQV-SVIGKAGGDKWKSMTD 79
>04_04_0224 -
23738105-23738273,23738364-23738472,23738702-23738804,
23738895-23738926,23739342-23739592,23739639-23739754,
23740271-23740526,23740760-23740847,23740985-23741062,
23741238-23741313,23741532-23741590,23742639-23742711
Length = 469
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 483 NKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSNRHSSKLYSKQQ*IRPGCPVQGHTTSP 656
++L K +F N Y +Y G+LP +N +S+ + +R G P+ SP
Sbjct: 290 SELIKGSFDFIGLNYYTSNYAGSLPPSNGLNNSYSTDARANLTAVRNGIPIGPQAASP 347
>12_02_0827 + 23492583-23492633,23493018-23493566,23493722-23494012
Length = 296
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 94 KRSKQSTSERYSTESSVDPTT-TAAGAKSNYSTATKSITTAVAATTESPASFATAEP 261
+ +K+ST + S+ S AA A ++ S+ T + TTA ++ +PA+ A A+P
Sbjct: 145 RNTKRSTKKSSSSSSRQGGGAGNAAAAATSSSSTTSTSTTATTSSAAAPAAAAAADP 201
>04_04_0223 -
23723055-23723223,23723316-23723424,23723588-23723690,
23723781-23723812,23724024-23724241,23724322-23724437,
23725055-23725310,23725719-23725806,23725928-23726005,
23726199-23726274,23726525-23726583,23727715-23728066
Length = 551
Score = 31.9 bits (69), Expect = 0.70
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +3
Query: 483 NKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSNRHSSKLYSKQQ*IRPGCPVQGHTTSP 656
+KL K F N Y +Y NLP +N +++ + +R G P+ SP
Sbjct: 372 SKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASP 429
>03_02_0382 -
7958634-7959272,7959358-7959583,7959725-7959810,
7959909-7959989,7960102-7960200,7960348-7960466,
7960557-7960677,7960831-7960881,7961041-7961142,
7962610-7962717,7962877-7962962,7963353-7963449
Length = 604
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 73 AESVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNY-STATKSITTAVAATTESPASFA 249
AE++++ + K++ ER T+ + AA A S ST T + VAA +P + A
Sbjct: 487 AEALEALELEKKTVEERRKTKEETAAVSGAADAASGVTSTVTPAAGAGVAAGAAAPGAGA 546
Query: 250 TA 255
TA
Sbjct: 547 TA 548
>03_01_0185 - 1485023-1485733
Length = 236
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 258
S R S ++ P TT ++ +TAT + TT V T +P + A+
Sbjct: 35 SVVSRLSAAGNISPATTTPPTMTSSATATSAKTTRVTVPTPAPNTVHDAD 84
>06_01_0363 -
2588356-2588532,2588612-2588737,2588811-2588888,
2589584-2589715,2590768-2590878,2590964-2591191
Length = 283
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 709 QEEIP*CQCYICSILEKVRREVEYNVGKRKTAVP 810
+E+IP +C +C E++ RE+ V K++ A+P
Sbjct: 42 KEDIPYIRCQVC---ERIAREISAQVAKKQQALP 72
>06_01_0326 + 2372176-2373057,2373146-2373610
Length = 448
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = -1
Query: 155 VVGSTDDSVEYRSLVDCFDRXLDLTDSATTKXLNTNEHT 39
V+GS++ +++ S+ +C D +D+TD +T ++ + T
Sbjct: 252 VMGSSNIWIDHVSMSNCSDGLIDITDGSTAITISNSHFT 290
>04_04_0887 + 29095087-29096166
Length = 359
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 472 TAATTNSTRTHSSCSATTDTGSIT 543
T AT RTH S SA+ TG++T
Sbjct: 44 TTATWRRARTHPSASASASTGTLT 67
>01_06_0626 + 30701538-30701939
Length = 133
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 85 KSXKRSKQSTSERYSTESSVDPTTTAAGAKSN--YSTATKSITTAVAATTESPASFA 249
K K + TS + + + P+ TA G ++ ++TAT S+ + T+ SP++ A
Sbjct: 52 KHEKPTTTCTSTNPMSTTVMPPSLTATGTDTSDHHATATASVFNGLGRTSSSPSNVA 108
>01_05_0743 +
24835349-24836009,24836925-24837068,24837154-24837306,
24837627-24837742,24837826-24837993,24838610-24838737,
24838827-24838926,24839119-24839205
Length = 518
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +3
Query: 462 LNQYSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSNRHSSKLYSKQQ*IRPGCPVQG 641
+ Q+ + NKL K K+ + N + G ++RS +S + ++ +R G P G
Sbjct: 343 MKQFRAMNKLKKVALKVVAENLSDEEITGLKEMFRSLDTDNSGTITLEE--LRSGLPKLG 400
Query: 642 HTTSPAVA*QLMHS 683
S + QLM +
Sbjct: 401 TKISESEIRQLMEA 414
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,381,538
Number of Sequences: 37544
Number of extensions: 246403
Number of successful extensions: 1021
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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