Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F05
(887 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 4e-13
SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_7134| Best HMM Match : HMG_box (HMM E-Value=2e-16) 52 5e-07
SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22) 46 5e-05
SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22) 46 5e-05
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 42 7e-04
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.025
SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05) 37 0.025
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 33 0.31
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.71
SB_11880| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.92) 32 0.71
SB_871| Best HMM Match : 7tm_1 (HMM E-Value=0.0017) 32 0.71
SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31) 31 1.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 31 1.6
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033) 30 2.9
SB_4659| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13) 30 2.9
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_49511| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_42485| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 5.0
SB_40497| Best HMM Match : NDT80_PhoG (HMM E-Value=5.1) 29 5.0
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_19704| Best HMM Match : FAD_binding_2 (HMM E-Value=0.48) 29 5.0
SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 29 6.6
SB_24733| Best HMM Match : Shugoshin_C (HMM E-Value=4.2) 29 6.6
SB_18916| Best HMM Match : GPS (HMM E-Value=1e-17) 29 6.6
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 6.6
SB_18164| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 28 8.8
SB_58810| Best HMM Match : DUF1613 (HMM E-Value=1.8) 28 8.8
SB_53176| Best HMM Match : Homeobox (HMM E-Value=0) 28 8.8
SB_35467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 28 8.8
SB_17966| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 28 8.8
>SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 72.5 bits (170), Expect = 4e-13
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +2
Query: 647 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQ 826
NKP+G +AY FF+Q RE+ +++ S+ A FSK AE+W MSE+EK+ F + A +
Sbjct: 10 NKPKGAKSAYNFFLQDQREKLQREEGKFSL--ADFSKVSAEKWKNMSEEEKETFVQKAGK 67
Query: 827 DKHRFDLEMQNYVPP 871
DK RF EMQ+Y PP
Sbjct: 68 DKERFKEEMQSYTPP 82
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/82 (32%), Positives = 50/82 (60%)
Frame = +2
Query: 617 KARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE 796
K R +++ NKP+ ++AY F+ R++ KK P+ S A SK E W+ M++ +
Sbjct: 90 KKRKKQTKDPNKPKRCLSAYFHFINLKRDDVKKDNPNASG--GALSKVLGEMWSKMTDDD 147
Query: 797 KQRFHEMAEQDKHRFDLEMQNY 862
K ++ +MA++DK R++ EM+ +
Sbjct: 148 KTQYQDMAKKDKVRYESEMKAF 169
>SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 57.2 bits (132), Expect = 2e-08
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = +2
Query: 617 KARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE 796
K R R N P+ +T Y F+ RE+ + ++P++ F +K W+ MS+ +
Sbjct: 132 KRRRKTLRDTNAPKAPLTGYVQFLNEQREKVRSEHPELP--FPEVTKILGAEWSKMSQDD 189
Query: 797 KQRFHEMAEQDKHRFDLEMQNY 862
KQR+ + AE+DK R+ +E++NY
Sbjct: 190 KQRYLDDAERDKERYIIELENY 211
>SB_7134| Best HMM Match : HMG_box (HMM E-Value=2e-16)
Length = 228
Score = 52.4 bits (120), Expect = 5e-07
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +2
Query: 614 NKARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFA--AFSKKCAERWNTMS 787
+ A+ + + N P+ A+ F Q R ++ + D + + +K A+ WN +
Sbjct: 42 SSAKQDKEKDPNAPKKPANAFFMFCQQQRTVMQEDHKDATAVMGHHELTKSLAKEWNNLL 101
Query: 788 EKEKQRFHEMAEQDKHRFDLEMQNYVPPK 874
EK+ ++EM E+DK R++LEM+ Y K
Sbjct: 102 PDEKKVYYEMYERDKERYELEMKQYSSDK 130
>SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 50.0 bits (114), Expect = 3e-06
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 647 NKPRGRMTAYAFFVQ---TCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEM 817
NKP+ +T Y +V+ + RE K ++P ++ F +K + WN++ +EKQ+F +
Sbjct: 192 NKPKAPVTGYVHYVRFLNSRRESVKHQHPHLT--FPEITKMLGQEWNSLLPEEKQKFLDE 249
Query: 818 AEQDKHRFDLEMQNY 862
AE+DK R+ E++ Y
Sbjct: 250 AEEDKKRYVEELRAY 264
>SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22)
Length = 299
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/76 (26%), Positives = 44/76 (57%)
Frame = +2
Query: 647 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQ 826
N+P+ +T+Y + Q R + KKYP++ + K +++W MSE+ K+ + E E+
Sbjct: 150 NQPKMPLTSYFRYCQKHRAKLAKKYPNLKS--TELAAKLSKKWRKMSEERKKAYTEQYEE 207
Query: 827 DKHRFDLEMQNYVPPK 874
+K ++ ++ +++ K
Sbjct: 208 EKKEYETQLLDFLKNK 223
>SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)
Length = 523
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/82 (28%), Positives = 41/82 (50%)
Frame = +2
Query: 617 KARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE 796
+ R + N P+ +T Y F+ RE+ + + PD+ F ++ W+ + +
Sbjct: 165 RKRKKAHKDVNAPKAPLTGYVRFLNEHREKVRSENPDLP--FHEVTRILGNMWSQLPTPQ 222
Query: 797 KQRFHEMAEQDKHRFDLEMQNY 862
KQ F E AE+DK R+ E++ Y
Sbjct: 223 KQLFLEEAEKDKERYMKELEEY 244
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 41.9 bits (94), Expect = 7e-04
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +2
Query: 647 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQ 826
N P+ M+AY ++ R+E K K P +SV SK E W +++K K + E A
Sbjct: 540 NAPKRAMSAYMLWLNDTRQEIKDKNPGISV--TEVSKVAGEMWKNLTDKSK--WEEKAAI 595
Query: 827 DKHRFDLEMQNY 862
+K ++ M+ Y
Sbjct: 596 EKQKYVQRMKEY 607
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 36.7 bits (81), Expect = 0.025
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 ACVTISAEIVCSFVLXILVVAESVKSXKRSKQSTSERYSTESSVDPTTTAAG-AKSNYST 189
A TI+A + S + A + ++++T+ +T + V TTTAA S S
Sbjct: 1120 AATTIAAAVTASTASVVTTTATVAAATTTAEKATT---TTAAMVKATTTAAAVTASTASV 1176
Query: 190 ATKSITTAVAATTESPASFATA 255
TK+ T A A TT A+ TA
Sbjct: 1177 VTKTATVAAATTTAEKATTLTA 1198
Score = 34.3 bits (75), Expect = 0.13
Identities = 33/179 (18%), Positives = 54/179 (30%), Gaps = 2/179 (1%)
Frame = +1
Query: 19 VTISAEIVCSFVLXILVVAESVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATK 198
VT SAE+ + +V A++ S ++T + ++ TT A A + STA+
Sbjct: 1077 VTASAEVTSEMISSSMVQAKAASSITTPLKTTVVAVTAAATTTAATTIAAAVTA-STASV 1135
Query: 199 SITTA--VAATTESPASFATAEPIFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 372
TTA AATT + + T +
Sbjct: 1136 VTTTATVAAATTTAEKATTTTAAMVKATTTAAAVTASTASVVTKTATVAAATTTAEKATT 1195
Query: 373 XXNFXXXXXXXXXXXXXXXXXXXXXXXXXXXINTAATTNSTRTHSSCSATTDTGSITEA 549
TAA +T T ++ +A+T + T A
Sbjct: 1196 LTAAMVEATTTAAAVTASTASVVTTTAEKATTTTAAMVEATTTEAAVTASTASVVTTTA 1254
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 130 TESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEP 261
T ++ P TT A + TK TT + ATT++P + P
Sbjct: 6106 TSTTEPPVTTPTTAPTTTPPTTKQTTTQLPATTKAPTATKPTTP 6149
>SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05)
Length = 905
Score = 36.7 bits (81), Expect = 0.025
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +1
Query: 115 SERYSTESSVDPTTTAAGAKSNYSTA----TKSITTAVAATTESPASFATAEPI 264
SE +TESS P T + KS+ +TA T +TT+ A T +PA+ TA I
Sbjct: 565 SEAATTESSTVPQTVVSETKSSTTTATITTTSEVTTSAAVLTVAPAATTTASAI 618
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 35.1 bits (77), Expect = 0.077
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 61 ILVVAESVKSXKRSKQSTSERYSTESSVDPT-TTAAGAKSNYSTATKSITTAVA---ATT 228
++ + +V K +T+E+ +T ++ + T TT A + +T TK+ TT+V+ ATT
Sbjct: 210 VVASSSAVIMTNAPKITTTEQLATTTAAETTPTTTTSASTTTATTTKATTTSVSTTTATT 269
Query: 229 ESPASFATAE 258
+ S TAE
Sbjct: 270 KEEESTTTAE 279
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 33.9 bits (74), Expect = 0.18
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 ADACVTISAEIVCSFVLXILVVAESVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNYS 186
A A T + + + + A + + + +T+ + ++V T TAA + +
Sbjct: 677 ATATATATVTVTATATVTATATATATATATATAATTTATATATATVTATVTAAASATAAV 736
Query: 187 TATKSITTAVAAT-TESPASFATA 255
TAT ++T V AT T + A+ ATA
Sbjct: 737 TATVTVTVTVTATVTVTAATAATA 760
Score = 32.3 bits (70), Expect = 0.54
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 ACVTISAEIVCSFVLXILVVAESVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTA 192
A T++ + + L + V + + + + +T ++ TTTA + +TA
Sbjct: 287 ATATVTVIVTVTATLAVTVTVTETAAAATATVTATVTTTTTATATATTTATATATTTATA 346
Query: 193 TKSIT-TAVAATTESPASFATA 255
T + T TA A T + + ATA
Sbjct: 347 TATATATATATATVTATATATA 368
Score = 31.9 bits (69), Expect = 0.71
Identities = 20/81 (24%), Positives = 38/81 (46%)
Frame = +1
Query: 13 ACVTISAEIVCSFVLXILVVAESVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTA 192
A T++ + + + V A + ++ + + + ++V TTTA + +TA
Sbjct: 279 ATTTVTVTATATVTVIVTVTATLAVTVTVTETAAAATATVTATVTTTTTATATATTTATA 338
Query: 193 TKSITTAVAATTESPASFATA 255
T + TTA A T + + ATA
Sbjct: 339 T-ATTTATATATATATATATA 358
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 79 SVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 258
S + K + S++ +++ +TT A + ST + +TAV ATT SPA+ TA
Sbjct: 463 STSTTKATTTSSTSTTKATTTLSTSTTKATTTPSTSTTKATTSTAVEATT-SPAATETAP 521
Query: 259 P 261
P
Sbjct: 522 P 522
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 100 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTES 234
S +S+++ YS + TTT A + + T SITTA A TT S
Sbjct: 478 SCKSSNDYYSVSNKATTTTTKLTALTTITHMTVSITTARATTTSS 522
>SB_11880| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.92)
Length = 425
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATA 255
+ +E T ++ + TTT A A +TA ++ TTA ATT + + TA
Sbjct: 335 TAAEVTMTTTAAEVTTTTAAAAEATTTAAEATTTAAEATTTAAEATTTA 383
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 127 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATA 255
+T + V TTTAA + + A ++ TTA ATT + + TA
Sbjct: 334 TTAAEVTMTTTAAEVTTTTAAAAEATTTAAEATTTAAEATTTA 376
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATA 255
+ +E +T ++ + TTT A+ +T +TT AA E+ + A A
Sbjct: 317 TAAEVTTTTTATEVTTTTTAAEVTMTTTAAEVTTTTAAAAEATTTAAEA 365
Score = 29.1 bits (62), Expect = 5.0
Identities = 24/148 (16%), Positives = 37/148 (25%), Gaps = 3/148 (2%)
Frame = +1
Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAA---TTESPASFATAEPIFXXXX 279
+ +E T ++ + TTT A+ +T +TT A TT + A+ T
Sbjct: 13 TATEVTMTTTAKEVTTTTTAAEVTMTTTAAEVTTTTTATEVTTTTTAAEVTMTTTAAEVT 72
Query: 280 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXXXXXX 459
Sbjct: 73 MTTTATEATMTTTAAEVTTTTTAAKVTTTTTAAEVTMTTTAKEVTMTTTAAEVPSTTTAA 132
Query: 460 XXINTAATTNSTRTHSSCSATTDTGSIT 543
TAA T T T ++ ATT +T
Sbjct: 133 EATTTAAATEVTTTTTAAEATTTATEVT 160
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 127 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATA 255
+T ++ + TTTAA A + TA ++ TTA ATT + + TA
Sbjct: 358 ATTTAAEATTTAAEATT---TAAEATTTAAEATTTAAEATTTA 397
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 100 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEPI 264
++ +T+ +T ++ + TTTAA A + TA ++ TTA ATT + + + + I
Sbjct: 356 AEATTTAAEATTTAAEATTTAAEATT---TAAEATTTAAEATTTAAEATTSYQSI 407
>SB_871| Best HMM Match : 7tm_1 (HMM E-Value=0.0017)
Length = 1675
Score = 31.9 bits (69), Expect = 0.71
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -1
Query: 884 PSCPLVXHSSASPSRIDACPV-QPSH 810
P PL H+S SP+++ CP+ +PSH
Sbjct: 1565 PDIPLKSHNSPSPAQVTQCPIFRPSH 1590
>SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +2
Query: 650 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQD 829
K + M A+ + + R K+YP + A S + E WN +S ++++ + + A +
Sbjct: 100 KVKRPMNAFMIWARLHRSTIAKRYPQANN--AEISIRLGEIWNDLSSEQQKPYFDEATRL 157
Query: 830 KHRFDLEMQNYV 865
K + E N+V
Sbjct: 158 KDKHKAEHPNWV 169
>SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 109 STSERYST---ESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 243
ST E ST S+V PT+T + T+T TT +A TTESP S
Sbjct: 165 STVEPTSTVEPTSTVVPTSTVVPTSTVEPTSTVEPTTMMAPTTESPTS 212
>SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31)
Length = 367
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +2
Query: 665 MTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFD 844
M ++ + + R + ++ P + A SK + WN ++ K+K+ F E AE+ + R
Sbjct: 98 MNSFMIWAKVMRRKFAEENPKLHN--AEISKLLGKAWNELTTKDKRPFVEKAERLRIRHM 155
Query: 845 LEMQNY 862
E NY
Sbjct: 156 KEHPNY 161
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 127 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 258
+ E+++ P TTAA + T T TTA TT +P + A AE
Sbjct: 1250 AAETTMAPETTAAETTAATVTTTTLETTAALETTMAPETTAAAE 1293
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 127 STESSVDPTTTAAGAKSNY-STATKSITTAVAATTESPASFATAE 258
S E++V P TTAA + T + TTA A TTE+ A AT +
Sbjct: 2057 SAETTVAPETTAAPDTTLVPDTTVAAETTAAAETTETTAVPATTD 2101
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 22 TISAEIVCSFVLXILVVAESVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKS 201
T +A I + + + + + +T+ +T ++ TTTA + T +
Sbjct: 26 TTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTITITTVT 85
Query: 202 ITTAVAATTES 234
ITTAVA T S
Sbjct: 86 ITTAVANKTVS 96
>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
Length = 382
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 22 TISAEIVCSFVLXILVVAESVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKS 201
T +A I + + + + + +T+ +T ++ TTTA + T +
Sbjct: 148 TTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTITITTVT 207
Query: 202 ITTAVAATTES 234
ITTAVA T S
Sbjct: 208 ITTAVANKTVS 218
>SB_4659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +3
Query: 471 YSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSNRHSSKLYSKQQ*IRPGC 629
Y+ KLY N F R+ G+L Y C N+H + + GC
Sbjct: 103 YTVRTKLYNNVVSNFEAGEVREPIGGHLADYVDCPNKHLRQTFLHPDVQARGC 155
>SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13)
Length = 1027
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/147 (14%), Positives = 40/147 (27%), Gaps = 2/147 (1%)
Frame = +1
Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKSIT--TAVAATTESPASFATAEPIFXXXXX 282
+T+ + ++ TTAA + +TA ++T T AAT + + A
Sbjct: 556 ATTAAATVTTAAATVTTAAATVTTVTTAAATVTTVTTAAATVTTVTTAAATVTTVATAAA 615
Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXXXXXXX 462
Sbjct: 616 TVTTVTTAAATLTTVTTAAATLTTVTTAAATLTTVTTAAATLTTAAATVTTVTTAAATLT 675
Query: 463 XINTAATTNSTRTHSSCSATTDTGSIT 543
+ TAA T +T T ++ + TT ++T
Sbjct: 676 TVTTAAATLTTVTIAAATLTTAAATLT 702
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/80 (21%), Positives = 34/80 (42%)
Frame = +1
Query: 13 ACVTISAEIVCSFVLXILVVAESVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTA 192
A + + V + A +V + + + + + +++ TTAA + +TA
Sbjct: 594 AATVTTVTTAAATVTTVATAAATVTTVTTAAATLTTVTTAAATLTTVTTAAATLTTVTTA 653
Query: 193 TKSITTAVAATTESPASFAT 252
++TTA A T + AT
Sbjct: 654 AATLTTAAATVTTVTTAAAT 673
>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 252
+T+ +T ++ TTT A + +TAT + TT TT + + T
Sbjct: 5 TTTTTTTTTTTTTTTTTTAATTATITTATATTTTTTTTTTTTTTTTTT 52
>SB_49511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 806 FHEMAEQDKHRFDLEMQNYVPPK 874
++EM E+DK R++LEM+ Y K
Sbjct: 37 YYEMYERDKERYELEMKQYSSDK 59
>SB_42485| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1565
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = -1
Query: 152 VGSTDDSVEYRSLVDCFDRXLDLTDSATTKXLNTNEHTISALIVTQASAG 3
+ +T ++++ D D + L+ + +TK +NTN+H + +I AG
Sbjct: 489 ISATQTTLKWLKQEDGSDIEIPLSQTVSTKDVNTNQHKLILMIKDTQLAG 538
>SB_40497| Best HMM Match : NDT80_PhoG (HMM E-Value=5.1)
Length = 360
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 67 VVAESVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASF 246
+ A+ + Q+T++ +++ P+TT + STA TTA ATT++ A +
Sbjct: 266 ITAKITTESTTATQATTKT-KEYTTIKPSTTEESTTNEASTAEFESTTAAQATTKTEA-Y 323
Query: 247 ATAEP 261
T +P
Sbjct: 324 TTKKP 328
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 675 MHSLCRRAEKNTRRNTLMSVLYLQHSRKSAQRGGIQCRKKKNSGSMRWLNRTSIDSTWRC 854
M SL R+ +N R M L SRK + + R +N G M+ L S + R
Sbjct: 1283 MKSLAHRSGRNGGR---MKTLAHPSSRKGGRMKSLANRSGRNGGRMKSLAHPSSRNGGRM 1339
Query: 855 RTMXHQ 872
+T+ H+
Sbjct: 1340 KTLAHR 1345
>SB_19704| Best HMM Match : FAD_binding_2 (HMM E-Value=0.48)
Length = 190
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 768 SAHFFENAANITLTSGY---FFLCSSRHVCTKNA*AVMRPRGL 649
S H F + T GY +F C+S H CT + A++ GL
Sbjct: 134 SLHRFRAKNTVLATGGYGRAYFSCTSAHTCTGDGTAMVTRAGL 176
>SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 106 QSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 243
++T+ +T ++ TTTAA S + ++ TTA A TT + A+
Sbjct: 335 EATTTATATTTTAAITTTAATTTSEAAATAEATTTATATTTVTAAT 380
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +1
Query: 4 PADACVTISAEIVCSFVLXILVVAESVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNY 183
P + +T SA + S + S+ + STS + SS+ ++T + SN
Sbjct: 3049 PPTSGITSSAGVNISSTITPTTTFTSIIKSESGIPSTSVASVSRSSISSSSTIS---SNT 3105
Query: 184 STATKSITTAVAATTESPASFAT 252
S+ TK +T + A T S T
Sbjct: 3106 SSTTKRSSTRITAITSSALIITT 3128
>SB_24733| Best HMM Match : Shugoshin_C (HMM E-Value=4.2)
Length = 689
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 714 RNTLMSVLYLQHSRKSAQRGGIQCRKKKNSGSMRW 818
+++++S LY++ R+ + G+Q RK K G W
Sbjct: 28 KSSILSTLYIEEGRQDIYKWGVQ-RKSKRKGIRGW 61
>SB_18916| Best HMM Match : GPS (HMM E-Value=1e-17)
Length = 1470
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 136 SSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 243
SSV PT+ A S+ +T T A TTE+PA+
Sbjct: 841 SSVKPTSNPATVLSDGTTENPETTEASKTTTEAPAT 876
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 VVAESVKSXKRSKQSTSERYSTESSV--DPTTTAAGAKSNYSTATKSITTAVAATTESPA 240
V+ S++S + STS S ESS+ + TT+ S++ S TT+V ++
Sbjct: 936 VLTSSMESSSMATTSTSSTPSFESSMTTNSTTSTPAEAVPISSSVSSTTTSVLTSSMESF 995
Query: 241 SFAT 252
S AT
Sbjct: 996 SMAT 999
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 127 STESSVDPTTTAAGAKSNY-STATKSITTAVAATTESPASFATAE 258
S E++V P TTAA + T + TTA A TTE+ A AT +
Sbjct: 244 SAETTVAPETTAAPDTTLVPDTTVAAETTAAAETTETTAVPATTD 288
>SB_18164| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 854
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +3
Query: 471 YSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSNRHSSKLYSKQQ*IRPGC 629
Y+ KLY F R+ G+L Y C N+H + + GC
Sbjct: 439 YTVRTKLYNKVVSNFEAGEVREPIGGHLADYVDCPNKHLGQTFRHPDVQARGC 491
>SB_58810| Best HMM Match : DUF1613 (HMM E-Value=1.8)
Length = 989
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +3
Query: 471 YSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSNRHSSKLYSKQQ*IRPGC 629
Y+ KLY F R+ G+L Y C N+H + + GC
Sbjct: 544 YTVRTKLYNKVVSNFEAGEVREPIGGHLADYVDCPNKHLGQTFRHPDVQARGC 596
>SB_53176| Best HMM Match : Homeobox (HMM E-Value=0)
Length = 373
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 130 TESSVDPTTTAAGAKSNYSTATKSITTA 213
T S DP T AAGA S+ +T T+ TA
Sbjct: 43 TSKSGDPATLAAGAGSSEATRTRRYRTA 70
>SB_35467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFA 249
++S + T S TT+ A A S+Y+ AT S ++ + +SFA
Sbjct: 72 TSSHAHVTSSYTHVTTSYAHATSSYAHATSSFAHVTSSYAHATSSFA 118
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEP 261
+T+ T + PTT A + + AT A AA PA+ A A P
Sbjct: 129 ATTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPAAAAAAPP 179
>SB_17966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 469 NTAATTNSTRTHSSCSATTDTGSITE 546
NTA ++N+ R H++C T T S T+
Sbjct: 16 NTATSSNTKRQHATCRTNTATSSNTK 41
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 28.3 bits (60), Expect = 8.8
Identities = 22/149 (14%), Positives = 39/149 (26%)
Frame = +1
Query: 97 RSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEPIFXXX 276
R+ + + + ++ TAA A + +TAT + T A T + + AT
Sbjct: 106 RTAATATAAAAATAAASVAATAAAAATAAATATATTTATAATATAAATATATGTTTATAT 165
Query: 277 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXXXXX 456
Sbjct: 166 VTATATATVTAAATATATATATATATTTSTATVTATATVTVTATAATTVTATVTAATTVT 225
Query: 457 XXXINTAATTNSTRTHSSCSATTDTGSIT 543
TAATT + ++ +AT T ++T
Sbjct: 226 VTVTATAATTVTVTVTATVTATV-TATVT 253
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,064,943
Number of Sequences: 59808
Number of extensions: 310089
Number of successful extensions: 1844
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1799
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2538363813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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