Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_F05
         (887 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein...    32   0.027
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     29   0.25 
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   2.3  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           25   2.3  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   2.3  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           25   2.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   3.1  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   4.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   5.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   5.4  
Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein...    24   7.1  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    24   7.1  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   7.1  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           23   9.4  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   9.4  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   9.4  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   9.4  

>AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein
           protein.
          Length = 178

 Score = 31.9 bits (69), Expect = 0.027
 Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +1

Query: 22  TISAEIVC-SFVLXILVVAESVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATK 198
           T+   ++C +FV   L + E     + ++Q   +RY    +     T   A ++ +T ++
Sbjct: 27  TVVVVLLCLTFVADALTIQEL--RAQIAQQRIQQRYGVTVATTSAATTTAATTSAATTSE 84

Query: 199 SITTAVAATTESPAS 243
           + TTA A+TT++  S
Sbjct: 85  ATTTAAASTTQASDS 99



 Score = 27.9 bits (59), Expect = 0.44
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +1

Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 258
           +T+   S  ++ + TTTAA + +  S +  + TTA A TT    + ++++
Sbjct: 72  TTAATTSAATTSEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSSSD 121


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = +1

Query: 79  SVKSXKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 258
           SV S   ++ ST+   +T +  + TTT     +  +T T+  TT   ATT   A+  TAE
Sbjct: 127 SVASPTTAEASTTTEAATTTQ-EATTTEEATTTEEATTTEKATTTEEATTTEEAT-TTAE 184



 Score = 26.6 bits (56), Expect = 1.0
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +1

Query: 97  RSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 243
           R   ST+    T S   PTT  A   +  +T T+  TT   ATT   A+
Sbjct: 115 RPTTSTAAPEGT-SVASPTTAEASTTTEAATTTQEATTTEEATTTEEAT 162



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 100 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTE 231
           ++++T+   +T +    TT  A      +T  ++ TTA A TTE
Sbjct: 146 TQEATTTEEATTTEEATTTEKATTTEEATTTEEATTTAEATTTE 189



 Score = 25.0 bits (52), Expect = 3.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 243
           +T E  +TE +   TTT     +  +T T+  TT   ATT + A+
Sbjct: 145 TTQEATTTEEA---TTTEEATTTEKATTTEEATTTEEATTTAEAT 186


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 127 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 252
           +T S+   TTT +      +T T ++ T   ATT +PAS  T
Sbjct: 163 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDSTATTTTPASTTT 204



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 243
           +T+  +S      PTTT     ++ +T T +  TTA   TT  P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 280


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 127 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 252
           +T S+   TTT +      +T T ++ T   ATT +PAS  T
Sbjct: 162 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTT 203



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 243
           +T+  +S      PTTT     ++ +T T +  TTA   TT  P S
Sbjct: 234 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 279


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 127 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 252
           +T S+   TTT +      +T T ++ T   ATT +PAS  T
Sbjct: 162 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTT 203



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 243
           +T+  +S      PTTT     ++ +T T +  TTA   TT  P S
Sbjct: 234 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 279


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 109 STSERYSTESSVDPTTT---AAGAKSNYSTATKSITTAVAATTESPAS 243
           +T+   +T ++V PTTT   A G  +  + A+  +TT  +  T +P+S
Sbjct: 40  TTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSS 87


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTA-TKSITTAVAATTESPAS 243
           +T+  +S +    PTTT     ++ +T  T   TTA   TT  P S
Sbjct: 235 TTTTTWSDQPPPPPTTTTTTVWTDPTTTITTDYTTAYPPTTNEPPS 280



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 127 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 252
           +T S+   TTT +      +T T ++ T   ATT +PA   T
Sbjct: 163 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTT 204


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 186 NSNKVNYNSSCSNNRISSKLCNSRT 260
           N+N  N +SSC NN +SS   N+ T
Sbjct: 157 NNNNSNSSSSC-NNHVSSNTNNNGT 180


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 109 STSERYSTESSVDPTTTAAGAKSNYST 189
           ST   YS++S+   TTT + + S++ST
Sbjct: 468 STYCTYSSDSTTTTTTTKSASTSSHST 494


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 831 LSCSAISWNRCFSFSDIVFH 772
           L C+A   NRC S  D++ H
Sbjct: 131 LGCNAGQTNRCSSLKDLIKH 150


>Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein
           protein.
          Length = 81

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +2

Query: 716 KYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKD 877
           K+  ++++    S  C E  +T +EKE Q   E ++ D+      ++    PKD
Sbjct: 2   KFLTIALLVCLLSVVCCEEASTAAEKE-QATTEASDSDEAAEQPNVEKDDSPKD 54


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 453 TKLLNQYSSNNKLYKNTFKLFSNNRYRQ 536
           T  LNQY  + +L  N F L+ +N+  Q
Sbjct: 45  TMYLNQYWKDERLAFNAFALWGDNQKDQ 72


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +2

Query: 701 EEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQR 805
           +E K +  +  V+ AAF + CA+    +  +++ R
Sbjct: 325 DERKTELDEAKVMLAAFVQDCADSATALGSEDQVR 359


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 127 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 252
           +T S+   TTT +      +T T ++ T   ATT +PA   T
Sbjct: 163 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTT 204



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 243
           +T+  +S      PTTT     ++ +T T +  TTA   TT  P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 280


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 243
           +T+  +S      PTTT     ++ +T T +  TTA   TT  P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 280


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 109 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 243
           +T+  +S      PTTT     ++ +T T +  TTA   TT  P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTSEPPS 280


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +2

Query: 773 WNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPK 874
           W T+      + H   +Q + +   + + YVPP+
Sbjct: 235 WTTVVRGRPSQRHRQPQQQQQQQQQQGERYVPPQ 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,666
Number of Sequences: 2352
Number of extensions: 9761
Number of successful extensions: 63
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)