Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_F04
(767 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 64 1e-12
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 64 1e-12
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.4
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 2.4
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 2.4
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 23 3.1
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 4.1
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 7.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 7.2
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 9.5
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 64.1 bits (149), Expect = 1e-12
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Frame = +2
Query: 269 HLVAGISGGVTSTLILHPLDLIKIRFAVNDGRTATVPRYDGLSSAFVTIVKKEGVRGLYR 448
+L +G + G TS ++PLD + R A + G+ + GL + I K +G+ GLYR
Sbjct: 118 NLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYR 177
Query: 449 GVTPNVWGSGSAWGFYFLFYNAIKTWIQGGNARTP--LGPGLHMLAAAEAGVLSLVMTNP 622
G +V G YF FY+ + + +TP + G+ + AG++S P
Sbjct: 178 GFGVSVQGIIIYRAAYFGFYDTARGMLPDPK-KTPFLISWGIAQVVTTVAGIVSY----P 232
Query: 623 IWVVKTRLCLQYSEEHVADNKRYKGMVDGLLKIYRTEGIRGLYRG 757
V+ R+ +Q YK + IY+TEG ++G
Sbjct: 233 FDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 59.3 bits (137), Expect = 4e-11
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Frame = +2
Query: 266 EHLVAGISGGVTSTLILHPLDLIKIRFAVN--DGRTATVPRYDGLSSAFVTIVKKEGVRG 439
+ L G++ ++ T + P++ +K+ V + + RY G+ FV I K++G
Sbjct: 13 DFLAGGVAAAISKTTVA-PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLS 71
Query: 440 LYRGVTPNVWGSGSAWGFYFLFYNAIKTWIQGGNARTP--LGPGLHMLAAA-EAGVLSLV 610
+RG NV F F + K GG + L + LA+ AG SL
Sbjct: 72 YWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLC 131
Query: 611 MTNPIWVVKTRLCLQYSEEHVADNKRYKGMVDGLLKIYRTEGIRGLYRGF 760
P+ +TRL + + + G+ + L KI++ +GI GLYRGF
Sbjct: 132 FVYPLDFARTRLAADVGK--AGGEREFTGLGNCLTKIFKADGITGLYRGF 179
Score = 42.3 bits (95), Expect = 5e-06
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2
Query: 551 PLGPGLHMLAAAEAGVLSLVMTNPIWVVKTRLCLQYSEEHVADNKRYKGMVDGLLKIYRT 730
P+ LA A +S PI VK L +Q+ + +++ +RYKGM+D ++I +
Sbjct: 7 PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66
Query: 731 EGIRGLYRG 757
+G +RG
Sbjct: 67 QGFLSYWRG 75
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 64.1 bits (149), Expect = 1e-12
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Frame = +2
Query: 269 HLVAGISGGVTSTLILHPLDLIKIRFAVNDGRTATVPRYDGLSSAFVTIVKKEGVRGLYR 448
+L +G + G TS ++PLD + R A + G+ + GL + I K +G+ GLYR
Sbjct: 118 NLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYR 177
Query: 449 GVTPNVWGSGSAWGFYFLFYNAIKTWIQGGNARTP--LGPGLHMLAAAEAGVLSLVMTNP 622
G +V G YF FY+ + + +TP + G+ + AG++S P
Sbjct: 178 GFGVSVQGIIIYRAAYFGFYDTARGMLPDPK-KTPFLISWGIAQVVTTVAGIVSY----P 232
Query: 623 IWVVKTRLCLQYSEEHVADNKRYKGMVDGLLKIYRTEGIRGLYRG 757
V+ R+ +Q YK + IY+TEG ++G
Sbjct: 233 FDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 59.3 bits (137), Expect = 4e-11
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Frame = +2
Query: 266 EHLVAGISGGVTSTLILHPLDLIKIRFAVN--DGRTATVPRYDGLSSAFVTIVKKEGVRG 439
+ L G++ ++ T + P++ +K+ V + + RY G+ FV I K++G
Sbjct: 13 DFLAGGVAAAISKTTVA-PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLS 71
Query: 440 LYRGVTPNVWGSGSAWGFYFLFYNAIKTWIQGGNARTP--LGPGLHMLAAA-EAGVLSLV 610
+RG NV F F + K GG + L + LA+ AG SL
Sbjct: 72 YWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLC 131
Query: 611 MTNPIWVVKTRLCLQYSEEHVADNKRYKGMVDGLLKIYRTEGIRGLYRGF 760
P+ +TRL + + + G+ + L KI++ +GI GLYRGF
Sbjct: 132 FVYPLDFARTRLAADVGK--AGGEREFTGLGNCLTKIFKADGITGLYRGF 179
Score = 42.3 bits (95), Expect = 5e-06
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2
Query: 551 PLGPGLHMLAAAEAGVLSLVMTNPIWVVKTRLCLQYSEEHVADNKRYKGMVDGLLKIYRT 730
P+ LA A +S PI VK L +Q+ + +++ +RYKGM+D ++I +
Sbjct: 7 PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66
Query: 731 EGIRGLYRG 757
+G +RG
Sbjct: 67 QGFLSYWRG 75
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 537 PPCIHVLMAL*NRK*NPQAEPEPQTFGVTPL 445
P C+ V+M+ + P+A P T GVT L
Sbjct: 254 PTCLIVIMSWVSFWIKPEAAPARVTLGVTSL 284
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 306 VDVTPPDIPATRCSYLMWLRSA 241
V V PPDI ++L W+ SA
Sbjct: 332 VPVEPPDILMPALTWLGWINSA 353
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -3
Query: 261 LMWLRSASLEDDG-FGF 214
L W SASLE+D FGF
Sbjct: 13 LFWQNSASLENDNEFGF 29
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 23.0 bits (47), Expect = 3.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 371 TVPRYDGLSSAFVTIVKKEGVRG 439
TVPRY G+ S+ I +K G G
Sbjct: 83 TVPRYKGVPSSLNVISEKIGNGG 105
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.1
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 583 RRSGGLVSRYDEPHMGREDSP--LPPVQRGAR 672
R GLVS P GRE P PP R +R
Sbjct: 384 RNRSGLVSGSSTPGTGREHDPAKFPPSFRISR 415
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 139 HLYLPAHTFPKFFNETRYSRFFTKHYA 59
+L+LP T KFF + S+ T Y+
Sbjct: 203 NLHLPRFTLEKFFTDYCNSKTNTGEYS 229
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 139 HLYLPAHTFPKFFNETRYSRFFTKHYA 59
+L+LP T KFF + S+ T Y+
Sbjct: 203 NLHLPRFTLEKFFTDYCNSKTNTGEYS 229
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 512 AIKTWIQGGNARTPLGPG 565
++ W+ GGNA PG
Sbjct: 577 SVPDWMMGGNANRNFMPG 594
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,092
Number of Sequences: 438
Number of extensions: 6202
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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