Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_E23
(432 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306 31 0.53
02_05_1191 + 34856635-34856775,34856878-34856942,34857096-348571... 30 0.92
10_08_0573 + 18872720-18872781,18873261-18873610,18873917-188743... 29 1.6
10_08_0809 - 20725858-20725950,20726375-20726545,20726895-207271... 28 3.7
09_04_0331 - 16738148-16738231,16738232-16738318,16738486-167385... 28 3.7
06_01_0273 + 2022479-2022592,2022830-2022973,2023524-2023601,202... 28 3.7
06_03_1047 - 27133869-27134345,27134444-27134701,27134841-271350... 27 4.9
08_01_0637 + 5537421-5539547 27 6.5
12_01_0660 + 5585172-5585356,5585717-5585761,5586942-5587026,558... 27 8.6
10_08_0659 + 19647037-19647464,19647569-19647659,19648998-196490... 27 8.6
02_05_0966 - 33143383-33143464,33143946-33144087,33144136-331441... 27 8.6
>10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306
Length = 387
Score = 30.7 bits (66), Expect = 0.53
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 83 TPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRK 262
+P+ + LKD L L C++C ++ ET+ D NE ++++ L+ H D K
Sbjct: 254 SPQKEALKDDLTTTLVQQCQQCQRTIQRIIETAGD----NEAQLFEALSVH-DELEKVLS 308
Query: 263 KYED 274
KY++
Sbjct: 309 KYKE 312
>02_05_1191 +
34856635-34856775,34856878-34856942,34857096-34857165,
34857499-34857570,34857668-34857871,34858793-34858866,
34858965-34859048,34859582-34859669,34859763-34859844,
34860178-34860251,34860474-34860581,34860683-34860747,
34861317-34861430,34861644-34861743,34861840-34861893,
34861972-34862067
Length = 496
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/74 (28%), Positives = 29/74 (39%)
Frame = +2
Query: 32 KRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELE 211
K +++S D VLG C P+ E+ + AL+ G K T G S E
Sbjct: 422 KLVVDSETDKVLGASMCGPDAPEIIQGMAVALKCGATKATFDSTVGIHPS----AAEEFV 477
Query: 212 IWKELTAHFDPDGK 253
+ LT P K
Sbjct: 478 TMRTLTRRVSPSSK 491
>10_08_0573 + 18872720-18872781,18873261-18873610,18873917-18874334,
18875172-18877180,18877390-18877398,18880291-18880398,
18880399-18880469,18880769-18881785
Length = 1347
Score = 29.1 bits (62), Expect = 1.6
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 309 YSGMTMPLALARSSYFFLHLPSGSKW 232
+SG++ P+++ S +HLPSG +W
Sbjct: 1169 WSGLSSPISIILSKLPTVHLPSGPRW 1194
>10_08_0809 -
20725858-20725950,20726375-20726545,20726895-20727101,
20727208-20727879
Length = 380
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 128 LELLEDDLSVPSLREYTCPCRARNPYTTP 42
+EL++DD S L E P R P TTP
Sbjct: 1 MELMDDDGSSSLLEELMAPLRRGTPTTTP 29
>09_04_0331 -
16738148-16738231,16738232-16738318,16738486-16738582,
16739139-16739176,16740140-16740196,16740487-16740964,
16741199-16741203
Length = 281
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 23 LENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYL-IK 199
L+ + LLE + C LG G+ T + + Q+ +KC E G S L +
Sbjct: 182 LDKEGLLEQLLHCGLGAGEVTARVEGVGGAGQQCPSCAVDKCKELSMLGIRRSRGGLNLM 241
Query: 200 NELEIWK 220
+ L +W+
Sbjct: 242 DFLAVWE 248
>06_01_0273 +
2022479-2022592,2022830-2022973,2023524-2023601,
2025361-2025585,2025684-2025782,2026177-2026235,
2026351-2026501,2026590-2026754
Length = 344
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 14 QXILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYL 193
Q +++ R + +Y LG G C +EL +ALE + + KG E +D
Sbjct: 233 QMVVQKCRKMTTYEKRKLGAGLCHLSPEELT----KALEMVAQDNPSFEAKGDELELDMD 288
Query: 194 IKNELEIWK 220
++E +W+
Sbjct: 289 AQSETTLWR 297
>06_03_1047 -
27133869-27134345,27134444-27134701,27134841-27135041,
27135242-27135584,27135674-27135732,27136256-27136581,
27136753-27136849,27137072-27137182,27137691-27138305,
27139578-27139880
Length = 929
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 23 LENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQE 163
+E+ RLL+SY + + G G+E + H++ T C CT A E
Sbjct: 25 MEDVRLLDSYDEEMGGGAAAAAAGEEEEAHVRVTGMT-CSACTSAVE 70
>08_01_0637 + 5537421-5539547
Length = 708
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 110 HLQEALETGCEKCTE--AQEKGAETSIDYLIKNELEIWKELTAH 235
HLQ L+TGCE + +Q++ E D + ++W E+ H
Sbjct: 625 HLQLVLDTGCELGAKLISQDELQEAGADGKLGLIAQVWVEVLCH 668
>12_01_0660 +
5585172-5585356,5585717-5585761,5586942-5587026,
5587666-5587730,5587887-5587986,5588209-5588250,
5588400-5588441,5588659-5588952
Length = 285
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 95 KELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEI 214
KELK L+ LE G K + + + I+Y+ K E+E+
Sbjct: 140 KELKQ-LESRLEKGISKIRARKNELLASEINYMAKREIEL 178
>10_08_0659 +
19647037-19647464,19647569-19647659,19648998-19649039,
19649179-19649237,19649559-19649634,19649735-19649866,
19650251-19650358,19651040-19651094,19651187-19651437
Length = 413
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 54 WIACSARASVLPKGRN*KIIFKKL*RLVARNALKPKKRALK 176
W AC A A+VL + ++ +L NA++P+ A+K
Sbjct: 143 WWACIALATVLIRSATVPLLVNQLKATQKLNAIRPEMEAIK 183
>02_05_0966 -
33143383-33143464,33143946-33144087,33144136-33144163,
33144453-33144631,33144776-33144866,33145643-33145951
Length = 276
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 74 GKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELE 211
G+ PE ELK + LET E+C A E E + + E E
Sbjct: 19 GRRVPEAAELKLR-RRTLETVLEQCQRALEMMREADLGIAVSEEEE 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,721,835
Number of Sequences: 37544
Number of extensions: 167387
Number of successful extensions: 500
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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