Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_E23
(432 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050416-1|AAH50416.1| 553|Homo sapiens solute carrier family 4... 31 1.7
AY033593-1|AAK54386.1| 553|Homo sapiens prostein protein. 31 1.7
BC142688-1|AAI42689.1| 1016|Homo sapiens elastin microfibril int... 31 2.2
BC009947-1|AAH09947.2| 580|Homo sapiens EMILIN1 protein protein. 31 2.2
AF162780-1|AAF25006.1| 1016|Homo sapiens elastin microfibril int... 31 2.2
AF088916-1|AAD42161.1| 1016|Homo sapiens emilin precursor protein. 31 2.2
AC013403-2|AAX93166.1| 1016|Homo sapiens unknown protein. 31 2.2
BC109063-1|AAI09064.1| 485|Homo sapiens tripartite motif-contai... 29 9.0
BC075058-1|AAH75058.1| 485|Homo sapiens tripartite motif-contai... 29 9.0
AF439153-1|AAL31641.1| 485|Homo sapiens Ro/SSA1 related protein... 29 9.0
AF360739-1|AAL11501.1| 485|Homo sapiens SSA protein SS-56 protein. 29 9.0
>BC050416-1|AAH50416.1| 553|Homo sapiens solute carrier family 45,
member 3 protein.
Length = 553
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 113 DDLSVPSLREYTCPCRARNPYTTPGA 36
+ LS PSL + CPCRAR + GA
Sbjct: 230 EGLSAPSLSPHCCPCRARLAFRNLGA 255
>AY033593-1|AAK54386.1| 553|Homo sapiens prostein protein.
Length = 553
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 113 DDLSVPSLREYTCPCRARNPYTTPGA 36
+ LS PSL + CPCRAR + GA
Sbjct: 230 EGLSAPSLSPHCCPCRARLAFRNLGA 255
>BC142688-1|AAI42689.1| 1016|Homo sapiens elastin microfibril
interfacer 1 protein.
Length = 1016
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 161 LGLQCISRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 24
LG + + N SL+LLED L SL++ T P P PG P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831
>BC009947-1|AAH09947.2| 580|Homo sapiens EMILIN1 protein protein.
Length = 580
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 161 LGLQCISRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 24
LG + + N SL+LLED L SL++ T P P PG P
Sbjct: 350 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 395
>AF162780-1|AAF25006.1| 1016|Homo sapiens elastin microfibril
interfase located protein protein.
Length = 1016
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 161 LGLQCISRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 24
LG + + N SL+LLED L SL++ T P P PG P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831
>AF088916-1|AAD42161.1| 1016|Homo sapiens emilin precursor protein.
Length = 1016
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 161 LGLQCISRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 24
LG + + N SL+LLED L SL++ T P P PG P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831
>AC013403-2|AAX93166.1| 1016|Homo sapiens unknown protein.
Length = 1016
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 161 LGLQCISRNQSLELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 24
LG + + N SL+LLED L SL++ T P P PG P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831
>BC109063-1|AAI09064.1| 485|Homo sapiens tripartite
motif-containing 68 protein.
Length = 485
Score = 28.7 bits (61), Expect = 9.0
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 11 LQXILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSI 184
L ++E RLL + L C G++LK +E + CE C+++ E A + +
Sbjct: 75 LANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQSPEHEAHSVV 132
>BC075058-1|AAH75058.1| 485|Homo sapiens tripartite
motif-containing 68 protein.
Length = 485
Score = 28.7 bits (61), Expect = 9.0
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 11 LQXILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSI 184
L ++E RLL + L C G++LK +E + CE C+++ E A + +
Sbjct: 75 LANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQSPEHEAHSVV 132
>AF439153-1|AAL31641.1| 485|Homo sapiens Ro/SSA1 related protein
FLJ10369 protein.
Length = 485
Score = 28.7 bits (61), Expect = 9.0
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 11 LQXILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSI 184
L ++E RLL + L C G++LK +E + CE C+++ E A + +
Sbjct: 75 LANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQSPEHEAHSVV 132
>AF360739-1|AAL11501.1| 485|Homo sapiens SSA protein SS-56 protein.
Length = 485
Score = 28.7 bits (61), Expect = 9.0
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 11 LQXILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSI 184
L ++E RLL + L C G++LK +E + CE C+++ E A + +
Sbjct: 75 LANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQSPEHEAHSVV 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,996,480
Number of Sequences: 237096
Number of extensions: 958802
Number of successful extensions: 2624
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2624
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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