Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_E18
(467 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 42 2e-04
AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical ... 35 0.025
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 31 0.31
U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical p... 31 0.31
AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical... 31 0.41
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 27 5.1
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 27 5.1
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 5.1
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 27 5.1
AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical ... 27 6.7
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 88 KNITGXYKDDADRELHYQSFKKHLAEINQLNEKNPY----TTFGINKFADYTPEEQQSRL 255
K YKD+++ + + +F K +++LN K+ T FGINKF+D + E RL
Sbjct: 48 KKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAEFHGRL 107
Query: 256 GLRLPAKKT 282
+P+ T
Sbjct: 108 SNVVPSNNT 116
>AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2D.1 protein.
Length = 382
Score = 35.1 bits (77), Expect = 0.025
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 88 KNITGXYKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSRL 255
K + YK +A+ +L Q+F K + +LN+ + F +N+F+D T E RL
Sbjct: 49 KKFSRTYKSEAENQLRLQNFVKSRNNVVRLNKNAQKAGRNSNFAVNQFSDLTTSELHQRL 108
Query: 256 GLRLPAKKT 282
R P T
Sbjct: 109 S-RFPPNLT 116
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = +1
Query: 106 YKDDADRELHYQSF---KKHLAEINQLNEKNPYTT-FGINKFADYTPEE 240
YKD+ +++ +Q F + ++N+ +K + T +GINKF+D + +E
Sbjct: 58 YKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKE 106
>U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical
protein R09F10.1 protein.
Length = 383
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 106 YKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 246
Y + E YQ F +++ E E+N +N+F D+T EE Q
Sbjct: 93 YTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQ 139
>AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical
protein Y113G7B.15 protein.
Length = 328
Score = 31.1 bits (67), Expect = 0.41
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +1
Query: 106 YKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSR 252
Y+ A+++ F K+ +I +LN K TFG NKFAD +E +R
Sbjct: 7 YRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSAR 59
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 79 FSSKNITGXYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFAD 225
F+SK + +D+ R L LA +++L E+N ++T N F D
Sbjct: 304 FNSKGDSSPALNDSLRPLKNSLLTHSLARLHKLVEENDFSTAHANAFVD 352
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform e protein.
Length = 2702
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 106 YKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 246
+ DDA ++ L+ +++ E TTFG+ K PE+++
Sbjct: 278 FSDDATYVASDILEERSLSTVHEFGESEASTTFGVGKLVTKKPEKEE 324
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 106 YKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 246
+ DDA ++ L+ +++ E TTFG+ K PE+++
Sbjct: 5124 FSDDATYVASDILEERSLSTVHEFGESEASTTFGVGKLVTKKPEKEE 5170
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
Frame = -1
Query: 215 LLMPNVV--YGFFSFNWF 168
LL PN++ Y FF+FNW+
Sbjct: 75 LLFPNILANYSFFTFNWY 92
>AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical
protein E01A2.2a protein.
Length = 712
Score = 27.1 bits (57), Expect = 6.7
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 106 YK-DDAD--RELHYQSFKKHLAEINQLNEKNPYTTFGINKFAD 225
YK DDA RE H ++ +K L N+L E+ + F ++ F D
Sbjct: 136 YKPDDAKKLREAHLENVQKRLQVFNELKEQGQFNKFSLD-FGD 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,669,839
Number of Sequences: 27780
Number of extensions: 161149
Number of successful extensions: 469
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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