Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E16
         (418 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   6.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   6.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    20   8.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    20   8.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    20   8.4  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 116 WGEVGSELEWTKPWDR 163
           WG  G +L+W  P  R
Sbjct: 132 WGFDGFDLDWEYPGQR 147


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -2

Query: 150 FVHSSSDPTSPQNPSGSFNDLCWAFSYSGV 61
           FV +++DP   +N + S  +    ++Y G+
Sbjct: 111 FVAAANDPEKMKNMTSSAIEFFETYNYDGL 140


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 116 WGEVGSELEWTKPWDR 163
           WG  G +L+W  P  R
Sbjct: 133 WGFDGFDLDWEYPCQR 148


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 116 WGEVGSELEWTKPWDR 163
           WG  G +L+W  P  R
Sbjct: 136 WGFDGFDLDWEYPGQR 151


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 149 KPWDRVLDD 175
           KPW RVL D
Sbjct: 587 KPWQRVLPD 595


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 44  YNVCGTTPEYEKAQQRSLNDPEGFWGEVGSE 136
           YN   +   Y+  +  S+ +PE  + ++GSE
Sbjct: 365 YNQDVSCTHYQNPEYISVVNPESPYPQIGSE 395


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +2

Query: 110 GFWGEVGSELE 142
           GFWG++G+ ++
Sbjct: 200 GFWGQLGAAVD 210


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +3

Query: 237 WTDTWSMEEASSSLWFTTRHSLTRSGKSLTMS*K 338
           W   W++ +   ++ F   H   R+G S  ++ K
Sbjct: 285 WGPEWNLLDGLDAVAFIDNHDNQRTGGSQILTYK 318


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +3

Query: 237 WTDTWSMEEASSSLWFTTRHSLTRSGKSLTMS*K 338
           W   W++ +   ++ F   H   R+G S  ++ K
Sbjct: 286 WGPEWNLLDGLDAVAFIDNHDNQRTGGSQILTYK 319


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +3

Query: 237 WTDTWSMEEASSSLWFTTRHSLTRSGKSLTMS*K 338
           W   W++ +   ++ F   H   R+G S  ++ K
Sbjct: 286 WGPEWNLLDGLDAVAFIDNHDNQRTGGSQILTYK 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,786
Number of Sequences: 336
Number of extensions: 2325
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)