Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E14
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   3.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   4.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   5.5  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    20   9.6  

>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 251 FVLYICGRFKLLFFDFIN 198
           FV+   G F ++F DF+N
Sbjct: 4   FVILFFGVFFIIFSDFVN 21


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 162 KIYKYLTXNKNYSQTLFPKH 103
           +IY+ L   KN+     PKH
Sbjct: 79  RIYQTLLSGKNHPHIQLPKH 98


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -3

Query: 254 VFVLYICGR 228
           +FV+Y+CGR
Sbjct: 241 LFVIYLCGR 249


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 250 LSYTSAVDSNYYF 212
           LS  +A+D NYY+
Sbjct: 54  LSNKNAIDFNYYY 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,337
Number of Sequences: 336
Number of extensions: 1510
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)