Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E14
         (460 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0073 - 509377-509425,510200-510270,510420-510539,510684-51...    27   5.5  

>02_01_0073 -
           509377-509425,510200-510270,510420-510539,510684-510769,
           510843-510915,510996-511718,513752-514081,514124-514210,
           514494-515250,515336-515399,515477-515609,515702-515801,
           515952-516088,516195-516341,516428-516478,517083-517148
          Length = 997

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 11/54 (20%), Positives = 30/54 (55%)
 Frame = -1

Query: 343 RITIVKMKIKL*YIYLNHQLL*FRILTENMYLSYTSAVDSNYYFLILLTNVHIF 182
           R++++ +     + ++ HQ +   ++    YL + S +++  YF ++  N+H+F
Sbjct: 472 RLSVIALDCLTWFEFMYHQDV---LVVPVSYLGFNSTIETTLYFKLVDINIHMF 522


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,735,529
Number of Sequences: 37544
Number of extensions: 96366
Number of successful extensions: 173
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)