Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_E12
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 427 e-120
Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical pr... 385 e-107
U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical pr... 30 2.4
U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical pr... 30 2.4
U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical pr... 30 2.4
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 29 5.4
X75331-1|CAA53080.1| 620|Caenorhabditis elegans acetylcholinest... 29 5.4
U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal acetyl... 29 5.4
U40417-9|AAA81417.2| 120|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate perme... 28 7.2
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 427 bits (1053), Expect = e-120
Identities = 199/265 (75%), Positives = 226/265 (85%), Gaps = 1/265 (0%)
Frame = +3
Query: 48 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEA 227
KI+ G +V++ GDEMTRIIWDLIKEKLILP++D+ +H +DLG+E+RD TDDQVTID A A
Sbjct: 5 KIQGGDIVEMQGDEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANA 64
Query: 228 IKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTG 407
KYNV +KCATITPDE RVEEFKLKKMWKSPNGTIRNILGGTVFRE II KN+PRLV
Sbjct: 65 TLKYNVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNT 124
Query: 408 WDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFKPESG-EAIKHVVHEYKGAGVALAMFN 584
W KPIIIGRHAHADQYKATDFVVPGAG LEI F G + I+ V ++KG GV+L+M+N
Sbjct: 125 WSKPIIIGRHAHADQYKATDFVVPGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLSMYN 184
Query: 585 TDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKKQFEDAGI 764
TD SI DFAH+SFK+AL RK+PLYLSTKNTILKKYDGRFKDIF +IY EY+ +F+ AGI
Sbjct: 185 TDDSIRDFAHASFKYALQRKFPLYLSTKNTILKKYDGRFKDIFAEIYP-EYEAEFKAAGI 243
Query: 765 WYEHRLIDDMVAYAMKSXGGFVWAC 839
WYEHRLIDDMVA AMKS GGFVWAC
Sbjct: 244 WYEHRLIDDMVAQAMKSDGGFVWAC 268
>Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical
protein C34F6.8 protein.
Length = 435
Score = 385 bits (947), Expect = e-107
Identities = 178/266 (66%), Positives = 213/266 (80%), Gaps = 2/266 (0%)
Frame = +3
Query: 48 KIKA-GPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAE 224
KIK PVVD+ GDEMTRIIW IK KLILP+LD+++ YDLG+E RD+T+DQVTID A
Sbjct: 26 KIKVDNPVVDLDGDEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAH 85
Query: 225 AIKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVT 404
AI +++VGIKCATITPDE R++EF LKKMW SPNGTIRNILGGTVFRE I+CKNIPRLV
Sbjct: 86 AILEHSVGIKCATITPDEARIKEFNLKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVP 145
Query: 405 GWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEY-KGAGVALAMF 581
GW +PI IGRHA DQYK TD V+P TL+++ G H V+++ K GV LAM+
Sbjct: 146 GWTQPITIGRHAFGDQYKCTDLVIPSGSTLQLLVNKPDGSKDVHNVYDFKKSGGVGLAMY 205
Query: 582 NTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKKQFEDAG 761
NTD SI FAHS F++AL +++PLYLSTKNTILKKYDGRFKDIFQDIY+++Y+ F++
Sbjct: 206 NTDESIKGFAHSCFQYALMKQWPLYLSTKNTILKKYDGRFKDIFQDIYEKKYEADFKNNK 265
Query: 762 IWYEHRLIDDMVAYAMKSXGGFVWAC 839
IWYEHRLIDD VA A+KS GGFVWAC
Sbjct: 266 IWYEHRLIDDQVAQALKSSGGFVWAC 291
>U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical
protein F35H12.2c protein.
Length = 571
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 585 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 743
TD +DF + F+ +L RKY STK I K R ++Y+ EYK+
Sbjct: 266 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 320
>U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical
protein F35H12.2a protein.
Length = 930
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 585 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 743
TD +DF + F+ +L RKY STK I K R ++Y+ EYK+
Sbjct: 625 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 679
>U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical
protein F35H12.2b protein.
Length = 934
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 585 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 743
TD +DF + F+ +L RKY STK I K R ++Y+ EYK+
Sbjct: 629 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 683
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 135 PFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKKMW 314
P +D V ++ R + + + KK+ + T+ PDE+ VE KL K
Sbjct: 2175 PDVDDSEDVEEIMRRPRKRIGPKEEVVLLSVTKKHPHSYRTKTV-PDEEPVEIVKLVKNR 2233
Query: 315 KSPNGTIRNI 344
+ PN T+R +
Sbjct: 2234 RLPNATLREV 2243
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -1
Query: 293 FFNSLLIRSYGRTFDAHIVFLYGLSTINCNLIISLITIFH 174
F+NSL I S TF +F+ STI+ + +I LI IFH
Sbjct: 59 FYNSLSISS---TFP--FIFMTEFSTISTSFLILLIAIFH 93
>X75331-1|CAA53080.1| 620|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 620
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 231 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 121
+WP++N + +++ + + YPS + + PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560
>U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal
acetylcholinesterase protein1 protein.
Length = 620
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 231 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 121
+WP++N + +++ + + YPS + + PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560
>U40417-9|AAA81417.2| 120|Caenorhabditis elegans Hypothetical
protein T08A9.13 protein.
Length = 120
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +3
Query: 174 MENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKK 308
++ + + + ++C +A+ +Y+V K T+T E++ E KK
Sbjct: 44 LQKAKELEQRTRVECQQALDQYDVLKKIPTLTEQERKENETLTKK 88
>AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate permease
family protein 6 protein.
Length = 823
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 444 ADQYKATDFVVPGAGTLEIIFKPESGE-AIKHVVHEYKGAGVALAMFNTDASI 599
ADQY+ ++ T II+ G+ A+K V ++YK G+++ NT+ +
Sbjct: 650 ADQYERLTHIIIDCST--IIYVDLMGQGALKDVYNDYKTIGISVLFANTNEHV 700
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,903,121
Number of Sequences: 27780
Number of extensions: 449481
Number of successful extensions: 1261
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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