Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_E11
(629 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,960... 120 1e-27
05_01_0154 + 1020650-1022050,1022304-1022373,1022496-1022617,102... 101 5e-22
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 78 5e-15
12_02_0932 + 24519204-24519380,24520074-24520128,24520251-245222... 34 0.11
01_01_0627 + 4725891-4725977,4727389-4727584,4727836-4727934,472... 33 0.25
04_04_1427 + 33491847-33491888,33493504-33493623,33493740-334939... 32 0.33
11_01_0240 + 1852186-1852371,1854183-1854237,1854391-1856267,185... 29 2.3
11_04_0351 + 16666398-16666532,16666911-16667048,16667398-166683... 28 7.0
05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225 28 7.0
07_03_1525 + 27448257-27448582,27450741-27450973,27451280-274529... 27 9.3
07_03_1523 + 27432991-27433199,27433585-27434185,27434468-274346... 27 9.3
>03_02_0579 -
9606317-9606892,9607571-9607799,9607902-9608011,
9608898-9609275,9609380-9609658,9610044-9610168,
9610269-9610335,9610582-9612006
Length = 1062
Score = 120 bits (288), Expect = 1e-27
Identities = 65/129 (50%), Positives = 78/129 (60%), Gaps = 3/129 (2%)
Frame = +2
Query: 212 AHTKSVEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLVK 391
A ++ E L G D+GLS ++ +YGPNEL S+W+LVLEQFDD LV+
Sbjct: 29 AWARTPSECLAELGVAADRGLSSEEAAARLRRYGPNELERHAAPSVWKLVLEQFDDTLVR 88
Query: 392 XXXXXXXXSFVLALF---EEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALK 562
SFVLAL+ E E +AFVEP VI LILI NAVVGVWQE NAE A+EALK
Sbjct: 89 ILLAAAVVSFVLALYDGAEGGEVGATAFVEPLVIFLILIVNAVVGVWQESNAEKALEALK 148
Query: 563 EYEPEMGKV 589
E + E V
Sbjct: 149 EIQSEHATV 157
>05_01_0154 +
1020650-1022050,1022304-1022373,1022496-1022617,
1022753-1023031,1023402-1023779,1024079-1024188,
1024394-1024622,1024725-1025303
Length = 1055
Score = 101 bits (242), Expect = 5e-22
Identities = 56/128 (43%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +2
Query: 212 AHTKSVEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLVK 391
A + VEE G +GLS + +GPNEL G ++ QLV +QFDD LV+
Sbjct: 23 AWARGVEECEARLGVSASRGLSSREAAARLRAHGPNELAEHPGPTLLQLVAQQFDDTLVR 82
Query: 392 XXXXXXXXSFVLALFEEHEDA-FSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEY 568
SF LAL SAFVEP VI LIL+ NA VGVWQE NAE A+EAL+E
Sbjct: 83 ILLAAAAVSFALALSSSAGAVTLSAFVEPLVIFLILVVNAAVGVWQETNAEKALEALREI 142
Query: 569 EPEMGKVI 592
+ + V+
Sbjct: 143 QSDHAAVL 150
>03_05_1014 -
29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 78.2 bits (184), Expect = 5e-15
Identities = 42/85 (49%), Positives = 53/85 (62%)
Frame = +2
Query: 338 GKSIWQLVLEQFDDLLVKXXXXXXXXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVG 517
G W+LVL+QFDDLLVK SF+LA E +AF+EP VI LIL ANA VG
Sbjct: 80 GTPFWKLVLKQFDDLLVKILIAAAVISFLLARMNG-ETGLAAFLEPSVIFLILAANAAVG 138
Query: 518 VWQERNAESAIEALKEYEPEMGKVI 592
V E NAE A+E L+ Y+ ++ V+
Sbjct: 139 VITETNAEKALEELRAYQADVATVL 163
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 203 MEDAHTKSVEEVLKYFGTDPDKGLSPDQI 289
MEDA+ KSV EVL FG DP KGLS +Q+
Sbjct: 1 MEDAYAKSVAEVLAAFGVDPTKGLSDEQV 29
>12_02_0932 +
24519204-24519380,24520074-24520128,24520251-24522202,
24522288-24522446,24522878-24523049,24523131-24523429,
24524037-24524285
Length = 1020
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 254 TDPDKGLSP--DQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDD 379
T P GLS + IKR Q+ YG N+ E +S W V E D
Sbjct: 130 TSPADGLSTAEESIKRRQDVYGLNKFTESEVRSFWVFVWEALQD 173
>01_01_0627 +
4725891-4725977,4727389-4727584,4727836-4727934,
4728392-4728443,4728662-4728798,4728880-4728980,
4729072-4729130,4729285-4729341,4729476-4729521,
4729650-4729729,4729835-4729925
Length = 334
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 281 DQIKRNQEKYGPNELPTEEGKSIWQLVLEQF-DDLLVKXXXXXXXXSFVLALFEEHEDAF 457
D + N+ YGPN+ P++E W+ V+EQ+ + L + L L E+ D
Sbjct: 110 DDPQANRPFYGPNQWPSDEVLPRWRKVMEQYHSEALRVAKSIARIIALALNLEEDFFDKP 169
Query: 458 SAFVEPFVILLIL 496
EP L +L
Sbjct: 170 EMLGEPIATLRLL 182
>04_04_1427 +
33491847-33491888,33493504-33493623,33493740-33493976,
33494754-33495638,33495733-33495837,33495920-33496064,
33496146-33496310,33496391-33496629,33496724-33496756,
33496840-33496921,33497017-33497177,33497282-33497455,
33497549-33497731,33497832-33498019,33498155-33498251
Length = 951
Score = 32.3 bits (70), Expect = 0.33
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Frame = +2
Query: 209 DAHTKSVEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLV 388
D +EEV + + GLS ++ R E +GPN+L EE K + + +F +
Sbjct: 13 DLENIPIEEVFEQLKCTRE-GLSSEEGNRRIEMFGPNKL--EEKK---ESKILKFLGFMW 66
Query: 389 KXXXXXXXXSFVLALFEEHEDAFSAFVEPFV-ILLILIANAVVGVWQERNAESAIEALKE 565
+ ++A+ + E FV I+++L+ N+ + +E NA +A AL
Sbjct: 67 NPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAALMA 126
Query: 566 YEPEMGKVIXGDKSGVQK 619
KV+ + G Q+
Sbjct: 127 NLAPKTKVLRDGRWGEQE 144
>11_01_0240 +
1852186-1852371,1854183-1854237,1854391-1856267,
1856342-1856500,1856692-1856863,1856965-1857263,
1857539-1857844
Length = 1017
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = +2
Query: 227 VEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDL 382
V+ + K + D G+ + Q YG N + +S W V + F D+
Sbjct: 101 VDGISKKVRSSFDHGICASDLDTRQNIYGVNRYAEKPSRSFWMFVWDAFQDM 152
>11_04_0351 +
16666398-16666532,16666911-16667048,16667398-16668306,
16668383-16668511,16668774-16668996,16669085-16669231,
16669332-16669573,16669660-16669689,16669784-16669865,
16669968-16670128,16670775-16670898,16671206-16671414
Length = 842
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 224 SVEEVLKYFGTDPDKGLSPDQIKRNQEKYGPN 319
+ E+V+ GTD GL+ ++ R + YGPN
Sbjct: 7 AAEDVVARLGTDEATGLTGEEAARLLKLYGPN 38
>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
Length = 554
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 217 HEIRGRSLKIFWHRPRQRP*SRPNKKEPR 303
HE+ G S ++ HR +P SRP K+ PR
Sbjct: 91 HEMPGLSRELIEHRLPIKPGSRPYKQPPR 119
>07_03_1525 +
27448257-27448582,27450741-27450973,27451280-27452919,
27453129-27453575
Length = 881
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 606 DLSPXMTLPISGSYSFKASMADSAFLSCHTPTTALAIRISKI 481
D + L S + ++ + D+ F+ C+TP +ALA R ++
Sbjct: 827 DALSIVELTPSRAENYMVFLGDTGFMECNTPLSALADRAKEL 868
>07_03_1523 + 27432991-27433199,27433585-27434185,27434468-27434642,
27434686-27436418,27436871-27437317
Length = 1054
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 606 DLSPXMTLPISGSYSFKASMADSAFLSCHTPTTALAIRISKI 481
D + L S + ++ + D+ F+ C+TP +ALA R ++
Sbjct: 1000 DALSIVELTPSRAENYMVFLGDTGFMECNTPLSALADRAKEL 1041
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,525,021
Number of Sequences: 37544
Number of extensions: 284137
Number of successful extensions: 790
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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