Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E11
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    27   0.11 
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    24   1.4  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   4.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   7.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.9  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 419 FVLALFEEHEDAFSAFVEPFVILLILIAN 505
           +V+ L +EH+DAF   V  F IL  +  N
Sbjct: 467 YVIILDDEHDDAFIGIVNQFHILQFITKN 495


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = -3

Query: 465 KAENASSCSSNKANTNEIIAANSKILTKRSSNCSKTN--CH 349
           K E  S    NK+  N  + ++S +   R +NC+     CH
Sbjct: 18  KCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCH 58


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/25 (36%), Positives = 19/25 (76%)
 Frame = +2

Query: 281 DQIKRNQEKYGPNELPTEEGKSIWQ 355
           ++ ++ +E+Y P ELP +E KS+++
Sbjct: 144 EEAQKPKEQYIPPELPNDE-KSLFE 167


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 233 EVLKYFGTDPDKGLSPDQIKRNQEKYGP 316
           E+LKY      +GLS D+ K ++   GP
Sbjct: 510 ELLKYLRKVDFEGLSGDKFKFDKNGDGP 537


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 245 ILRLLPRISCERPPWWNYYVAVS 177
           +L +L  ++  RP WW ++ A S
Sbjct: 15  LLTILIFVTSHRPAWW-FWTATS 36


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +2

Query: 521 WQERNAESAIEALKEYEPEMGK 586
           W + + ++A+EAL+ ++  + K
Sbjct: 411 WTQEDMDAALEALRNHDMSLTK 432


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 13  GFHCIRPADGPXRHNH 60
           G H + P  GP  H+H
Sbjct: 339 GNHTMGPTMGPPHHHH 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,291
Number of Sequences: 438
Number of extensions: 3128
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)