Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E09
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.32 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   0.99 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 544 YFFVTNILINFHLLNYILCKNY 609
           YF+  +I  N HLL ++LC  Y
Sbjct: 58  YFYCVSITFNVHLL-FLLCSGY 78



 Score = 25.0 bits (52), Expect = 0.57
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 526 FII--QHLYFFVTNILINFHLLNYILCKNYTLL 618
           FII   HL F    I  N HLL ++LC +Y  L
Sbjct: 173 FIIFTMHLLFCCAFIFFNMHLL-FLLCLDYFTL 204


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 189 EVSSVPVLNHIEPH*RCSLYQQSVLIPLSNIVK 287
           +  ++P L ++EP+ R  L  +  L  L NIVK
Sbjct: 96  DYDAIPWLQNVEPNLRPKLLLKHNLFLLDNIVK 128


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 14/68 (20%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = +1

Query: 373 RCYTDYI*FIFLIPKITFKMKTSKCIIG--IITVSDNYFRKFHTTLFLSI*KQFIIQHLY 546
           R  ++ +  + ++ KI  + +T+   +   I+T+S +YF  F    + +I  + ++  L 
Sbjct: 238 RVRSEVVKILNVLKKIALRRQTTNGDLDELIVTLSTHYFPVFSACDYFTIETKTVLDVLG 297

Query: 547 FFVTNILI 570
             VT +++
Sbjct: 298 VTVTYLIV 305


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 596 YVKTTHY*RPFATYYNVDH 652
           Y    HY R F T +NV H
Sbjct: 519 YQSLAHYLRVFFTVFNVVH 537


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 14/68 (20%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = +1

Query: 373 RCYTDYI*FIFLIPKITFKMKTSKCIIG--IITVSDNYFRKFHTTLFLSI*KQFIIQHLY 546
           R  ++ +  + ++ KI  + +T+   +   I+T+S +YF  F    + +I  + ++  L 
Sbjct: 312 RVRSEVVKILNVLKKIALRRQTTNGDLDELIVTLSAHYFPVFSACDYFTIETKTVLDVLG 371

Query: 547 FFVTNILI 570
             VT +++
Sbjct: 372 VTVTYLIV 379


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = +3

Query: 198 SVPVLNHI--EPH*RCSLYQQSVLIPLSNI 281
           ++P+ ++I   P+   S+Y  S L+PL+NI
Sbjct: 335 NLPLTHNIAHNPYPSHSIYPSSNLMPLNNI 364


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 290 SYVTLSYLYKHILHNYLPMYLSIIHHCIDVTQIIFDLY 403
           +Y  L+ +    ++  LP+ LSI+ +C+      F+LY
Sbjct: 257 AYAVLNSVLFQNVYKPLPIVLSIVKNCL---SYCFNLY 291


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 290 SYVTLSYLYKHILHNYLPMYLSIIHHCIDVTQIIFDLY 403
           +Y  L+ +    ++  LP+ LSI+ +C+      F+LY
Sbjct: 257 AYAVLNSVLFQNVYKPLPIVLSIVKNCL---SYCFNLY 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,314
Number of Sequences: 336
Number of extensions: 2474
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)