Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E08
         (430 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6D1K4 Cluster: Putative uncharacterized protein; n=1; ...    33   2.5  
UniRef50_Q57YH1 Cluster: Carnitine O-palmitoyltransferase, putat...    32   5.8  
UniRef50_Q2UIG6 Cluster: Predicted protein; n=1; Aspergillus ory...    31   7.7  
UniRef50_Q6BP23 Cluster: Palmitoyltransferase SWF1; n=2; Sacchar...    31   7.7  

>UniRef50_A6D1K4 Cluster: Putative uncharacterized protein; n=1;
           Vibrio shilonii AK1|Rep: Putative uncharacterized
           protein - Vibrio shilonii AK1
          Length = 142

 Score = 33.1 bits (72), Expect = 2.5
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 71  ILLFWIKISMSEALKPITSCAFVCTAHDNNDVCGVVFTLHTSFVRH 208
           +LL ++K++   A+    S  F+C      D+  VVF L+ S  R+
Sbjct: 54  VLLSYVKLNDGSAIMATFSSTFLCQVESEEDILNVVFALNKSHFRN 99


>UniRef50_Q57YH1 Cluster: Carnitine O-palmitoyltransferase,
           putative; n=1; Trypanosoma brucei|Rep: Carnitine
           O-palmitoyltransferase, putative - Trypanosoma brucei
          Length = 678

 Score = 31.9 bits (69), Expect = 5.8
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 20  IILVGFCMEAYFFSFFKILLFWIKISMSEALKPITSCAFVCTAHDNNDV 166
           ++L   C + +  +F K+   W++ S  EAL  ITSC+F     +N D+
Sbjct: 269 LVLANGCRKKWARAFGKL---WLEQSSREALDEITSCSFGIALDENTDL 314


>UniRef50_Q2UIG6 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 587

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 8   LIFYIILVGFCMEAYFFSFFKILLFWI 88
           L+F + L  FC+  +FFSF   LL W+
Sbjct: 72  LLFLVTLASFCVTLFFFSFSLALLPWL 98


>UniRef50_Q6BP23 Cluster: Palmitoyltransferase SWF1; n=2;
           Saccharomycetaceae|Rep: Palmitoyltransferase SWF1 -
           Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 377

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +2

Query: 11  IFYIILVGFCMEAYFFSFFKILLFWIKIS 97
           +FYII+V FC+  +F   +K+L  +++ S
Sbjct: 75  LFYIIVVSFCLHQFFTKVYKLLPLFVRKS 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 268,727,781
Number of Sequences: 1657284
Number of extensions: 4503797
Number of successful extensions: 11668
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11663
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)