Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E08
         (430 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    26   0.17 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    26   0.17 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    26   0.17 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   3.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   3.8  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   6.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   8.7  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 155 YHEPYKRTHNSLLV 114
           Y+EPY+RTH ++L+
Sbjct: 103 YNEPYQRTHENMLL 116


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 155 YHEPYKRTHNSLLV 114
           Y+EPY+RTH ++L+
Sbjct: 103 YNEPYQRTHENMLL 116


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 155 YHEPYKRTHNSLLV 114
           Y+EPY+RTH ++L+
Sbjct: 103 YNEPYQRTHENMLL 116


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +1

Query: 31  WILYGSVXXXXXXNITFLDQNFHVGSSQTN 120
           W+ YG         I F  + F + +S TN
Sbjct: 252 WVDYGCSPKKLIVGIPFYGRTFTLSNSNTN 281


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 10/22 (45%), Positives = 17/22 (77%), Gaps = 3/22 (13%)
 Frame = +3

Query: 33  DFVWKRI--FLV-FLKYYFFGS 89
           +F  K++  F+V F+KY+FFG+
Sbjct: 73  NFATKKLEQFIVRFMKYHFFGT 94


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 73  ITFLDQNFHVGSSQTNNELC 132
           +TFL   FH G+S      C
Sbjct: 80  LTFLSCRFHQGASYNTLNTC 99


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 5   ELIFYIILVGFCMEAYFFSF 64
           E + YIIL  F    YF  F
Sbjct: 283 EKLSYIILTSFLNNFYFIIF 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,877
Number of Sequences: 336
Number of extensions: 1311
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)