Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E06
         (854 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.8  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   7.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.1  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 402 IIDEY*RLCDDISGYLIVSRFVGSTCHLRISISVIVITGSNNSTTV 265
           ++ E   L + + G+L++     +T  L I I VIVI   N   TV
Sbjct: 200 LLSECVDLFNSLFGFLVLLLVALTTLQLLIYIQVIVIGTKNTIETV 245


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 155 TN*SNKMRPQRKEAGAFTKFRLLIWKN 235
           TN S     Q+K+AG    F LL ++N
Sbjct: 83  TNCSKCSEVQKKQAGKILTFVLLNYRN 109


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 641 YYYHMHLLSRC 609
           Y+Y+MHLL  C
Sbjct: 260 YFYYMHLLFCC 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,130
Number of Sequences: 336
Number of extensions: 4290
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)