Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E06
         (854 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport...    34   0.15 
Z81531-10|CAE17807.1|  367|Caenorhabditis elegans Hypothetical p...    32   0.60 
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr...    29   4.2  
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase...    29   4.2  
U41012-7|AAM75375.1|  639|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U41012-6|AAM75376.1|  642|Caenorhabditis elegans Hypothetical pr...    29   4.2  
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi...    29   4.2  
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical...    29   4.2  
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical...    29   4.2  
U97592-7|AAB52874.2|  332|Caenorhabditis elegans Sperm-specific ...    29   5.6  
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ...    28   7.4  
U97189-7|AAK68257.3|  782|Caenorhabditis elegans Hypothetical pr...    28   9.7  
U80454-4|AAB37876.3|  896|Caenorhabditis elegans Prion-like-(q/n...    28   9.7  

>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
           family protein 4 protein.
          Length = 1802

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +2

Query: 197 GAFTKFRLLIWKNLIQQWRHRLQTVVELLLPVI 295
           GA  + RLL+WKN +QQ R     + EL++P+I
Sbjct: 2   GALGQLRLLLWKNWLQQLRSPWFALFELVVPLI 34


>Z81531-10|CAE17807.1|  367|Caenorhabditis elegans Hypothetical
           protein F36D3.13 protein.
          Length = 367

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 212 FRLLIWKNLIQQWRHRLQTVVELLLPVITMTLILILRW 325
           FR L+ K  +    HR+ T+   LLP+I++ LI+I  W
Sbjct: 135 FRTLLIKYPLSHRLHRMSTLKYKLLPIISILLIIISLW 172


>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
           protein ZK1067.1 protein.
          Length = 1323

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 327 CHLRISISVIVITGSNNSTTVCKRCLHCCIKFFHISN 217
           C  +  ++  ++  +NN  TVCK+C H C + +H +N
Sbjct: 731 CMDQCPVNSFMVPDTNN--TVCKKCHHECDQNYHCAN 765


>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
           protein.
          Length = 1323

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 327 CHLRISISVIVITGSNNSTTVCKRCLHCCIKFFHISN 217
           C  +  ++  ++  +NN  TVCK+C H C + +H +N
Sbjct: 731 CMDQCPVNSFMVPDTNN--TVCKKCHHECDQNYHCAN 765


>U41012-7|AAM75375.1|  639|Caenorhabditis elegans Hypothetical
           protein C06A6.2a protein.
          Length = 639

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -3

Query: 780 LGLSGNLNANDKL---FDNSVAPRSESLNSTASTTSRVISSRAYIPLKALL 637
           +G+   +N N  +    DN +A RS+  +  ASTTS V+ +  Y  LK +L
Sbjct: 369 IGMPTTINGNKSIQTVLDNLIAARSKKEDHAASTTS-VLQAPNYSELKQML 418


>U41012-6|AAM75376.1|  642|Caenorhabditis elegans Hypothetical
           protein C06A6.2b protein.
          Length = 642

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -3

Query: 780 LGLSGNLNANDKL---FDNSVAPRSESLNSTASTTSRVISSRAYIPLKALL 637
           +G+   +N N  +    DN +A RS+  +  ASTTS V+ +  Y  LK +L
Sbjct: 369 IGMPTTINGNKSIQTVLDNLIAARSKKEDHAASTTS-VLQAPNYSELKQML 418


>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
           kinase protein.
          Length = 1374

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 327 CHLRISISVIVITGSNNSTTVCKRCLHCCIKFFHISN 217
           C  +  ++  ++  +NN  TVCK+C H C + +H +N
Sbjct: 782 CMDQCPVNSFMVPDTNN--TVCKKCHHECDQNYHCAN 816


>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
           protein Y105E8A.24b protein.
          Length = 1127

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 765 NLNANDKLFDNSVAPRSESLNSTASTTSRVIS 670
           NLN N     NS  P+S+S NS +  TSR +S
Sbjct: 65  NLNLNSISNHNSSIPKSKSNNSVSGITSRRVS 96


>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
           protein Y105E8A.24a protein.
          Length = 1161

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 765 NLNANDKLFDNSVAPRSESLNSTASTTSRVIS 670
           NLN N     NS  P+S+S NS +  TSR +S
Sbjct: 65  NLNLNSISNHNSSIPKSKSNNSVSGITSRRVS 96


>U97592-7|AAB52874.2|  332|Caenorhabditis elegans Sperm-specific
           family, class rprotein 2 protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
 Frame = +3

Query: 18  CSR----NELSVFTAGNECTL*NKKVY 86
           CSR    NEL +   GN+C + NKK+Y
Sbjct: 113 CSRRSDLNELPIVVVGNKCDVENKKIY 139


>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
           protein Y53C10A.9 protein.
          Length = 1564

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/49 (24%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
 Frame = +2

Query: 203 FTKFRLLIW----KNLIQQWRHRLQTVVELLLPVITMTLILILRWQVEP 337
           F+K  +++W    K     +R+ +Q  ++++LP++T+ L  +   ++EP
Sbjct: 823 FSKLMMVVWALLQKRAYYLYRNPVQITLQIILPLLTLWLFAVPFLRLEP 871


>U97189-7|AAK68257.3|  782|Caenorhabditis elegans Hypothetical
           protein C48B6.8 protein.
          Length = 782

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 792 NEFNLGLSGNLNANDKLFDNSVAPRSESLNSTASTTSRVISSRA 661
           N    G  GNL + D LFD S     ++++S  S T+++ + +A
Sbjct: 622 NSCKTGNMGNLPSLDALFDKSYRELLDAMDSYNSLTAKIENQKA 665


>U80454-4|AAB37876.3|  896|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 66
           protein.
          Length = 896

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 185 RKEAGAFTKFRLLIWKNLIQQ 247
           +K+AG  T+F   IWKN+I++
Sbjct: 540 KKDAGRVTQFSEYIWKNIIEK 560


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,466,521
Number of Sequences: 27780
Number of extensions: 381187
Number of successful extensions: 887
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)