Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E05
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   3.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   4.6  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 276 RTEDLSERSGADRVHGAGLQVDEDGAG 196
           +  DLS R+G+   H   L + + G G
Sbjct: 196 KARDLSPRNGSPTDHSPVLNLSKSGGG 222


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -2

Query: 143 CKSEAPWEAPVGXMPC 96
           C +E PW    G  PC
Sbjct: 351 CVNERPWSLYCGEPPC 366


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 48  WSPVLXLSSWALISVLARHRPHRCLPWGL 134
           W+ ++ L++W +IS   R +  + L  G+
Sbjct: 45  WTYLILLTTWTVISASTRIKSFKFLTIGV 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.313    0.132    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,356
Number of Sequences: 336
Number of extensions: 2950
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)