Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_E05
(603 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 248 6e-67
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 134 1e-32
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 132 3e-32
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 121 9e-29
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 28 1.2
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 27 1.6
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.1
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 2.8
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 26 3.7
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 25 6.4
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 25 6.4
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 25 6.4
SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subuni... 25 8.5
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 8.5
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 8.5
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 248 bits (606), Expect = 6e-67
Identities = 112/169 (66%), Positives = 132/169 (78%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HG+ G HG S+ Q ER+NVY+NEA+GGKYVPRA+LVDLEPGTMD+V+SG FG +FRP
Sbjct: 28 HGLDSAGIYHGTSEAQHERLNVYFNEAAGGKYVPRAVLVDLEPGTMDAVKSGKFGNLFRP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
DN ++GQSGAGN WAKGHYTEGAEL D+VLDVVR+E+E+CD LQGFQ
Sbjct: 88 DNIIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREAEACDALQGFQLTHSLGGGTGSGM 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
KIREEYPDR+M T+SV P+PK SDTVVEPYNATLS+HQL EN+
Sbjct: 148 GTLLLSKIREEYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVENS 196
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 134 bits (323), Expect = 1e-32
Identities = 65/165 (39%), Positives = 94/165 (56%), Gaps = 2/165 (1%)
Frame = +1
Query: 97 HGIXPTGASHG--ASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIF 270
HGI P G + AS + +++E GKYVPR+I VDLEP +D VR+GP+ +F
Sbjct: 28 HGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLF 87
Query: 271 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXX 450
P+ + G+ A NN+A+GHYT G ELVD V D +R+ +++C LQGF
Sbjct: 88 HPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGS 147
Query: 451 XXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 585
++ EY + +SV P+P+VS +VVEPYN+ L+ H
Sbjct: 148 GFGALLLERLAMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTH 192
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 132 bits (320), Expect = 3e-32
Identities = 64/175 (36%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLER------INVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPF 258
HGI P G S++ +++E GK+VPR+I VDLEP +D VR+GP+
Sbjct: 28 HGIGPDGFPTENSEVHKNNSYLNDGFGTFFSETGQGKFVPRSIYVDLEPNVIDQVRTGPY 87
Query: 259 GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXX 438
+F P+ V G+ A NN+A+GHYT G E++DSVL+ +R+ +++C LQGF
Sbjct: 88 KDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRRMADNCSGLQGFLVFHSFGG 147
Query: 439 XXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ EY + +SV P+P+VS +VVEPYN+ L+ H +N+
Sbjct: 148 GTGSGLGALLLERLNMEYGKKSNLQFSVYPAPQVSTSVVEPYNSVLTTHATLDNS 202
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 121 bits (291), Expect = 9e-29
Identities = 59/188 (31%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Frame = +1
Query: 46 VGHQSWXSVLGLSSPXSHGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEP 225
+G Q W + HGI P G + ++R +V++ ++ +Y+PRAIL+DLEP
Sbjct: 17 IGSQFWQQLC-----LEHGIGPDGTLESFATEGVDRKDVFFYQSDDTRYIPRAILIDLEP 71
Query: 226 GTMDSVRSGPFGQIFRPDNFVFGQS--GAGNNWAKGHYTEGAELVDSVLDVVRKESESCD 399
++++ S +G ++ P+N + ++ GAGNNWA G Y+ + + ++D++ +E++ D
Sbjct: 72 RVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDMIDREADGSD 130
Query: 400 CLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP-SPKVSDTVVEPYNATL 576
L+GF ++ + YP +I+ TYSV P S VSD VV+PYN+ L
Sbjct: 131 SLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLL 190
Query: 577 SVHQLXEN 600
++ +L N
Sbjct: 191 ALKRLTLN 198
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 27.9 bits (59), Expect = 1.2
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +2
Query: 320 PRDTTQRVLSSLTRSSM*SAKNQNLAIAYRASNLHIPSVAAPGPVWAPSSSQRSVKSTPT 499
PR++T++ L S++ S S+ Q + +S L+ PS AP P + SSS T
Sbjct: 219 PRESTEKPLLSVSALSS-SSHLQPTSATSSSSRLY-PSRPAPTPPASSSSSPLLSSQTVK 276
Query: 500 ES*THTQ*SPRPKYQTLSSNHTMR 571
+ ++ P P + S+++ +R
Sbjct: 277 TTTSNASRQPSPLVSSKSTDNIIR 300
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 319 AKGHYTEGAELVDSVLDVVRKESESCDCLQ 408
A+GH G ELV + D +RK+SE+ L+
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALE 212
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 109 PTGASHGASD--LQLERINVYYNEASGGKYVPRA 204
P+G S A+ L +E I+ Y A KY+PR+
Sbjct: 625 PSGVSESAASSFLDIENIDEYLESAENMKYLPRS 658
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 250 GPFGQIFRPDNFVFGQSGAG-NNWAKGHYTEGAEL 351
GP+G +F P F+F +G NW+ Y E A L
Sbjct: 157 GPYGTMFLPQQFIFDSNGRPLLNWSY-LYKEHAHL 190
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 392 LAIAYRASNLHIPSVAAPGPVWAPSSSQRSVK 487
LA+ Y + + +V APG +W+P+ +R K
Sbjct: 159 LAVRYGPLGIRV-NVCAPGTIWSPAWDERFKK 189
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 61 WXSVLGLSSPXSHGIXPTGASHGASDLQLERINV 162
W S+L S S + P H ASD + R+ +
Sbjct: 570 WYSILSTCSNPSELLDPLKDKHEASDTSMNRVEL 603
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 271 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 402
RP +F G++ G + E D ++ + + ESCDC
Sbjct: 955 RPSRLIF-YDNCGDSSGAGLCNKAYEHTDELITMAIERIESCDC 997
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 308 PAPDCPKTKLSGRKICPKGPERTESMVPGSKS 213
P+ PK L R I P GPE + + GS S
Sbjct: 20 PSTPPPKEVLHTRVIVPNGPEEIKLRLVGSHS 51
>SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subunit
Rpa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1227
Score = 25.0 bits (52), Expect = 8.5
Identities = 18/76 (23%), Positives = 31/76 (40%)
Frame = +1
Query: 43 IVGHQSWXSVLGLSSPXSHGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLE 222
+VGH+S + L A H A L+L +I +G P + +DLE
Sbjct: 604 VVGHESGWGCVQLDGKIVGWCTYKLAKHVADVLRLMKIEYAVKLRNGTATEPAKVPLDLE 663
Query: 223 PGTMDSVRSGPFGQIF 270
G + +G + ++
Sbjct: 664 IGYVPPSHNGQYPGLY 679
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 410 ASNLHIPSVAAPGPVWAPSSSQRSVKSTPTES 505
A+N+H+ SVAA PS+ V +T T S
Sbjct: 172 AANVHVLSVAASPNPSTPSNGPAPVSTTATPS 203
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 413 SNLHIPSVAAPGPVWAPSSSQRSVKSTPTE 502
S +H S A PGP+ PS+ ST E
Sbjct: 241 SPMHTYSSAVPGPISVPSAPYGRASSTIAE 270
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,343,563
Number of Sequences: 5004
Number of extensions: 45868
Number of successful extensions: 124
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 264253462
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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