Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_E05
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 291 2e-79
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 287 5e-78
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 281 4e-76
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 281 4e-76
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 281 4e-76
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 280 5e-76
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 182 2e-46
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 182 2e-46
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 135 2e-32
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 134 5e-32
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 134 5e-32
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 133 8e-32
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 133 8e-32
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 131 3e-31
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 129 2e-30
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 129 2e-30
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 126 9e-30
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 126 1e-29
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 126 1e-29
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 126 1e-29
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 126 1e-29
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 126 1e-29
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 126 2e-29
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 126 2e-29
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 105 3e-23
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 105 3e-23
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 3.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 3.4
Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear recep... 28 4.5
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 291 bits (715), Expect = 2e-79
Identities = 138/169 (81%), Positives = 144/169 (85%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI PTGA +G SDLQLERINVYYNEASGGKYVPRA LVDLEPGTMDSVR+GPFGQ+FRP
Sbjct: 28 HGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
DNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ESCDCLQGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGM 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
KIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQL ENT
Sbjct: 148 GTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 287 bits (703), Expect = 5e-78
Identities = 134/169 (79%), Positives = 142/169 (84%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P G G SDLQLERINVYYNEA+GGKYVPRA+LVDLEPGTMDSVRSGPFGQ+FRP
Sbjct: 28 HGIQPDGTYKGESDLQLERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
DNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+E CDCLQGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGM 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
KIREEYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQL ENT
Sbjct: 148 GTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 281 bits (688), Expect = 4e-76
Identities = 130/169 (76%), Positives = 141/169 (83%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P G G +DLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMDSVRSGPFGQ+FRP
Sbjct: 28 HGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
DNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+E CDCLQGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGM 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
KIREEYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQL ENT
Sbjct: 148 GTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 281 bits (688), Expect = 4e-76
Identities = 133/169 (78%), Positives = 140/169 (82%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P+G G SDLQLERINVYYNEA KYVPRA+LVDLEPGTMDSVRSGPFGQ+FRP
Sbjct: 28 HGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
DN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ES DCLQGFQ
Sbjct: 88 DNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGM 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQL ENT
Sbjct: 148 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 281 bits (688), Expect = 4e-76
Identities = 133/169 (78%), Positives = 140/169 (82%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P+G G SDLQLERINVYYNEA KYVPRA+LVDLEPGTMDSVRSGPFGQ+FRP
Sbjct: 28 HGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
DN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ES DCLQGFQ
Sbjct: 88 DNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGM 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQL ENT
Sbjct: 148 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 280 bits (687), Expect = 5e-76
Identities = 130/169 (76%), Positives = 141/169 (83%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P G G SDLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMDSVRSGPFGQ+FRP
Sbjct: 28 HGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
DNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+E CDCLQGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGM 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
KIREE+PDRIM+++SVVPSPKVSDTVVEPYNATLSVHQL ENT
Sbjct: 148 GTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENT 196
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 182 bits (443), Expect = 2e-46
Identities = 85/168 (50%), Positives = 114/168 (67%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HG+ G G + QLERI YY E G KYVPRAILVDL+P +++ VRS +G++F P
Sbjct: 28 HGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E+E+ D L+GFQ
Sbjct: 88 ENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGL 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXEN 600
K+REEY D+ ++T S++PS KVSDTVVEPYNA LS+ L +N
Sbjct: 148 GSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDN 195
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 182 bits (443), Expect = 2e-46
Identities = 85/168 (50%), Positives = 114/168 (67%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HG+ G G + QLERI YY E G KYVPRAILVDL+P +++ VRS +G++F P
Sbjct: 28 HGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E+E+ D L+GFQ
Sbjct: 88 ENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGL 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXEN 600
K+REEY D+ ++T S++PS KVSDTVVEPYNA LS+ L +N
Sbjct: 148 GSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDN 195
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 135 bits (327), Expect = 2e-32
Identities = 63/168 (37%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Frame = +1
Query: 97 HGIXPTG-ASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFR 273
HG+ G + + + + +++E+ GK+VPRAI VDLEP +D +R+G +G +F
Sbjct: 32 HGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFH 91
Query: 274 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXX 453
PD + G+ A NN+A+GHYT G EL+D VLD +RK++E+C+ LQGF
Sbjct: 92 PDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSG 151
Query: 454 XXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXE 597
++ E+ + +SV P+P+VS +VVEPYN+ L+ H E
Sbjct: 152 FSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLE 199
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 134 bits (324), Expect = 5e-32
Identities = 60/169 (35%), Positives = 97/169 (57%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P G S + E ++++ G+YVPR+I VDLEP +D +R+G + ++F P
Sbjct: 28 HGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQGF
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGF 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + +S+ P+P+VS VVEPYN+ L+ H E++
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 196
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 134 bits (324), Expect = 5e-32
Identities = 60/169 (35%), Positives = 97/169 (57%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P G S + E ++++ G+YVPR+I VDLEP +D +R+G + ++F P
Sbjct: 28 HGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQGF
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGF 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + +S+ P+P+VS VVEPYN+ L+ H E++
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 196
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 133 bits (322), Expect = 8e-32
Identities = 59/169 (34%), Positives = 95/169 (56%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P G E ++++ G+YVPR+I VDLEP +D +R+G + ++F P
Sbjct: 28 HGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQGF
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGF 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + +S+ P+P+VS VVEPYN+ L+ H E++
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 196
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 133 bits (322), Expect = 8e-32
Identities = 61/168 (36%), Positives = 97/168 (57%)
Frame = +1
Query: 100 GIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPD 279
G+ P S+G D + N +++E GK+VPRAI VDLEP +D VR+G + ++F P+
Sbjct: 34 GLMPDDTSYGVED---QSYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPE 90
Query: 280 NFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXX 459
+ G+ A NN+A+GHYT G EL+D V+D VR+ +E C LQGF
Sbjct: 91 QLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFT 150
Query: 460 XXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + +S+ P+P++S ++VEPYN+ L+ H E++
Sbjct: 151 SLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHS 198
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 131 bits (317), Expect = 3e-31
Identities = 58/169 (34%), Positives = 94/169 (55%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P G E ++++ G+YVPR+I VDLEP +D +R+G + ++F P
Sbjct: 28 HGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQGF
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGF 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + +S+ P+P+V VVEPYN+ L+ H E++
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHS 196
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 129 bits (311), Expect = 2e-30
Identities = 57/169 (33%), Positives = 94/169 (55%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P G + ++++ G+YVPR+I VDLEP +D +R+G + ++F P
Sbjct: 28 HGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
+ + G+ A NN+A+GHYT G EL+D+ LD +R+ +++C LQGF
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGF 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + +S+ P+P+VS VVEPYN+ L+ H E++
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 196
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 129 bits (311), Expect = 2e-30
Identities = 57/169 (33%), Positives = 94/169 (55%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P G + ++++ G+YVPR+I VDLEP +D +R+G + ++F P
Sbjct: 28 HGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHP 87
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
+ + G+ A NN+A+GHYT G EL+D+ LD +R+ +++C LQGF
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGF 147
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + +S+ P+P+VS VVEPYN+ L+ H E++
Sbjct: 148 TSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 196
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 126 bits (305), Expect = 9e-30
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLE--RINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIF 270
HGI P G + L ++ N +++E GK+VPRAI+VDLEP +D +R+G + +F
Sbjct: 33 HGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLF 92
Query: 271 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXX 450
P+ + G+ A NN+A+GHYT G E++D V+D VR+ E+C LQGF
Sbjct: 93 HPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGS 152
Query: 451 XXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + + + P+P+VS ++VEPYN+ L+ H E++
Sbjct: 153 GFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHS 203
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 126 bits (304), Expect = 1e-29
Identities = 57/169 (33%), Positives = 97/169 (57%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 276
HGI P G S D + ++++ G++VPR+I VDLEP +D +R+G + ++F P
Sbjct: 28 HGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHP 86
Query: 277 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 456
+ + G+ A NN+A+GHYT G E++D+ LD +R+ + +C+ LQGF
Sbjct: 87 EQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGF 146
Query: 457 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ EY + +S+ P+P++S +VVEPYN+ L+ H E++
Sbjct: 147 TSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHS 195
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 126 bits (304), Expect = 1e-29
Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
Frame = +1
Query: 97 HGIXPTGA-----SHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFG 261
HGI P G S G SD + + +++E G++VPRA++VDLEP +D +R+G +
Sbjct: 28 HGIQPDGQMPSDKSLGGSD---DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYR 84
Query: 262 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXX 441
+F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C LQGF
Sbjct: 85 SLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGG 144
Query: 442 XXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + +S+ P+P+VS VVEPYN+ L+ H E++
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 126 bits (304), Expect = 1e-29
Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
Frame = +1
Query: 97 HGIXPTGA-----SHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFG 261
HGI P G S G SD + + +++E G++VPRA++VDLEP +D +R+G +
Sbjct: 27 HGIQPDGQMPSDKSLGGSD---DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYR 83
Query: 262 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXX 441
+F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C LQGF
Sbjct: 84 SLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGG 143
Query: 442 XXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + +S+ P+P+VS VVEPYN+ L+ H E++
Sbjct: 144 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 197
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 126 bits (304), Expect = 1e-29
Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
Frame = +1
Query: 97 HGIXPTGA-----SHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFG 261
HGI P G S G SD + + +++E G++VPRA++VDLEP +D +R+G +
Sbjct: 28 HGIQPDGQMPSDKSLGGSD---DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYR 84
Query: 262 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXX 441
+F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C LQGF
Sbjct: 85 SLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGG 144
Query: 442 XXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + +S+ P+P+VS VVEPYN+ L+ H E++
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 126 bits (304), Expect = 1e-29
Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
Frame = +1
Query: 97 HGIXPTGA-----SHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFG 261
HGI P G S G SD + + +++E G++VPRA++VDLEP +D +R+G +
Sbjct: 28 HGIQPDGQMPSDKSLGGSD---DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYR 84
Query: 262 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXX 441
+F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C LQGF
Sbjct: 85 SLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGG 144
Query: 442 XXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ +Y + +S+ P+P+VS VVEPYN+ L+ H E++
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHS 198
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 126 bits (303), Expect = 2e-29
Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Frame = +1
Query: 97 HGIXPTG--ASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIF 270
HGI P G D + E IN ++ E +GGK+VPR + VDLEP +D VR+G + +F
Sbjct: 34 HGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLF 93
Query: 271 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXX 450
P+ + G+ A N +A+G YT G E++D V+D V++ +E+C+ LQGF
Sbjct: 94 HPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGS 153
Query: 451 XXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ EY + +++ P+P+VS ++VEPYN+ L H E++
Sbjct: 154 GFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHS 204
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 126 bits (303), Expect = 2e-29
Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Frame = +1
Query: 97 HGIXPTG--ASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIF 270
HGI P G D + E IN ++ E +GGK+VPR + VDLEP +D VR+G + +F
Sbjct: 6 HGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLF 65
Query: 271 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXX 450
P+ + G+ A N +A+G YT G E++D V+D V++ +E+C+ LQGF
Sbjct: 66 HPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGS 125
Query: 451 XXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLXENT 603
++ EY + +++ P+P+VS ++VEPYN+ L H E++
Sbjct: 126 GFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHS 176
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 105 bits (251), Expect = 3e-23
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGP-FGQIFR 273
HGI G + D+ ++ ++Y +A YVPRA+LVDLEP ++ + P F +F
Sbjct: 31 HGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFN 89
Query: 274 PDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXX 447
DN GAGNNWA G Y +G E+ + ++D++ +E+E+ + L G
Sbjct: 90 TDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTG 148
Query: 448 XXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLXEN 600
++RE +P +++ TYSV + S D VV PYN LS+ +L EN
Sbjct: 149 SGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIEN 200
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 105 bits (251), Expect = 3e-23
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Frame = +1
Query: 97 HGIXPTGASHGASDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGP-FGQIFR 273
HGI G + D+ ++ ++Y +A YVPRA+LVDLEP ++ + P F +F
Sbjct: 31 HGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFN 89
Query: 274 PDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXX 447
DN GAGNNWA G Y +G E+ + ++D++ +E+E+ + L G
Sbjct: 90 TDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTG 148
Query: 448 XXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLXEN 600
++RE +P +++ TYSV + S D VV PYN LS+ +L EN
Sbjct: 149 SGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIEN 200
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 3.4
Identities = 24/80 (30%), Positives = 31/80 (38%)
Frame = -1
Query: 348 LSTLCVVSLGPVVAGAGLSEDEVVRTEDLSERSGADRVHGAGLQVDEDGAGHVLAAGGFI 169
+S C G + AG+ ++ +L E A G G G GHV +AGG I
Sbjct: 464 ISKDCKNPKGMYASEAGMDDEYSALMAELGETPAAGAGAGGG------GGGHVASAGGGI 517
Query: 168 VVYIDALQLQVRGPMGGTGG 109
A G GG GG
Sbjct: 518 SAMTGAGGEAPGGGAGGRGG 537
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 3.4
Identities = 24/80 (30%), Positives = 31/80 (38%)
Frame = -1
Query: 348 LSTLCVVSLGPVVAGAGLSEDEVVRTEDLSERSGADRVHGAGLQVDEDGAGHVLAAGGFI 169
+S C G + AG+ ++ +L E A G G G GHV +AGG I
Sbjct: 464 ISKDCKNPKGMYASEAGMDDEYSALMAELGETPAAGAGAGGG------GGGHVASAGGGI 517
Query: 168 VVYIDALQLQVRGPMGGTGG 109
A G GG GG
Sbjct: 518 SAMTGAGGEAPGGGAGGRGG 537
>Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical
protein F54D1.4 protein.
Length = 536
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 2 HXKMRAIVHLQAGQLLVTSLGAQFLGSHLRXRTASXPPVPP 124
H + I++ + LL+T+ + L + + +S PPVPP
Sbjct: 371 HKILTDIINPEVSDLLLTTANCRKLSTQMGSSLSSVPPVPP 411
>AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear receptor
NHR-7 protein.
Length = 536
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 2 HXKMRAIVHLQAGQLLVTSLGAQFLGSHLRXRTASXPPVPP 124
H + I++ + LL+T+ + L + + +S PPVPP
Sbjct: 371 HKILTDIINPEVSDLLLTTANCRKLSTQMGSSLSSVPPVPP 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,680,717
Number of Sequences: 27780
Number of extensions: 293180
Number of successful extensions: 693
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -