Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E03
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48055-4|CAA88132.2|  301|Caenorhabditis elegans Hypothetical pr...   221   7e-58
Z95559-10|CAB63364.2|  327|Caenorhabditis elegans Hypothetical p...    31   1.1  
U13070-16|AAC46648.2|  185|Caenorhabditis elegans Hypothetical p...    31   1.5  
Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U10414-12|AAA19079.3|  497|Caenorhabditis elegans Nematode astac...    29   4.5  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    29   5.9  
Z81485-2|CAB03974.2|  708|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z74473-5|CAI79195.1|  245|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p...    28   7.8  
AL031633-19|CAA21031.1|  710|Caenorhabditis elegans Hypothetical...    28   7.8  
AF125952-3|AAD14699.1|  475|Caenorhabditis elegans Hypothetical ...    28   7.8  
AC006722-9|ABP57813.1|  475|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z48055-4|CAA88132.2|  301|Caenorhabditis elegans Hypothetical
           protein T07A5.2 protein.
          Length = 301

 Score =  221 bits (539), Expect = 7e-58
 Identities = 105/220 (47%), Positives = 138/220 (62%)
 Frame = +2

Query: 233 SASVKRYKYLKRLFKFNQMDFEFAAWQMVYLFIAPQKVFRNFNYRKHTKSQFARDDPAFL 412
           SA  K  ++ +RL    QMDFEFA WQM+YL I P KV++NF YRK TK QFARDDPAFL
Sbjct: 59  SAFAKLSRFTRRLVHIRQMDFEFALWQMLYLLIQPSKVYKNFIYRKRTKDQFARDDPAFL 118

Query: 413 VLLSIWLFLSSICFGLALDLTVGKVALFMLFVVFVDFIGAGILVSTLFWYLSNKHLRRDP 592
           VLL++ L  SSI +  AL L       F L+ VFVD IG G++++T+ W++SN+ LR+  
Sbjct: 119 VLLALSLLFSSIFYAYALGLEKIGFFTFFLWSVFVDCIGVGVVIATVLWWVSNRFLRK-V 177

Query: 593 EGPDVEWGYAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYM 772
              DVEWGY FDVH+NAFFP L LLH    +L+ +++    F+S L+ NTFW  +  YY+
Sbjct: 178 RDQDVEWGYCFDVHLNAFFPMLILLHVIVPILYPTLIDSPAFLSILLGNTFWFLAACYYV 237

Query: 773 YISFLGYSNLPFLQNTRXXXXXXXXXXXXXXXXXXXGWNL 892
           YI+FLGY+ LP L  T+                   GWN+
Sbjct: 238 YITFLGYTALPILHKTQYFLYPISFIFMFFVATLTGGWNI 277


>Z95559-10|CAB63364.2|  327|Caenorhabditis elegans Hypothetical
           protein Y41E3.15 protein.
          Length = 327

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
 Frame = +2

Query: 623 FDVHINAFFPPLSLL---------HCFQIVLFNSILSQAGFV-SCLVSNTFWLASIIYYM 772
           F V I   +PP+  L          C++I++F SI+     V SC +S + ++   ++  
Sbjct: 43  FGVFIEFLYPPIIYLIFKTKLIRHSCYKIIVFLSIIDMIATVCSCFISGSLFIQGAVFCS 102

Query: 773 YISFL 787
           Y SF+
Sbjct: 103 YPSFI 107


>U13070-16|AAC46648.2|  185|Caenorhabditis elegans Hypothetical
           protein F01F1.13 protein.
          Length = 185

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
 Frame = +3

Query: 729 WSQTRSGSPRSYTTCTFPSWDTATCRSCKTRGCSCC---RCPRY---SWSTWPP 872
           WS+ R G  +   TC  P     TC   K    SC      P Y   SW++W P
Sbjct: 64  WSKCREGIRKRRRTCNNPLPIGTTCSGQKVEKQSCAISSNVPEYLFGSWTSWNP 117


>Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical
           protein C49F8.1 protein.
          Length = 407

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 161 PNLHNYPRSTSPLPAPANYQPTTASASVKRYKYLKRLFKFNQMDFEFAA 307
           P L  YP  ++  PAP   QPT  +  ++  +  + L  FN  DF+  A
Sbjct: 273 PQLSQYPSPSTAAPAPVPEQPTLNNLPLEVKQSAQTL--FNDPDFQMLA 319


>U10414-12|AAA19079.3|  497|Caenorhabditis elegans Nematode astacin
           protease protein28 protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 795 ATCRSCKTRGCSCCRCPRYSWSTWPPCWPAGTS 893
           + C    +R C+ C+CPRY         P+GT+
Sbjct: 329 SNCGITDSRNCNQCKCPRYFTGASCDSLPSGTA 361


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 158 TPNLHNYPRSTSPLPAPANYQPTTASASV 244
           TP+    P STS  P P+   PTT  ++V
Sbjct: 484 TPSTQGVPTSTSNQPTPSTSNPTTPKSTV 512


>Z81485-2|CAB03974.2|  708|Caenorhabditis elegans Hypothetical
           protein C49F5.2 protein.
          Length = 708

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 720 SRVWSQTRSGSPRSYTTCTFPSWDTATCR 806
           SR  S+T S S  + T+CTFP+  T T R
Sbjct: 120 SRKKSRTSSSSMEASTSCTFPARQTKTKR 148


>Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical
           protein F42G4.3a protein.
          Length = 603

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 134 KMKYSTSPTPNLHNYPRSTSPLPAPANYQPTTASA 238
           K+      +P++  YPR  +P  + ANY  TT+++
Sbjct: 362 KLNQPADTSPSIVQYPRRQAPDSSRANYSATTSTS 396


>Z74473-5|CAI79195.1|  245|Caenorhabditis elegans Hypothetical
           protein F56H9.6 protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 20/71 (28%), Positives = 31/71 (43%)
 Frame = +3

Query: 681 SYSSTVYCLKRASSRVWSQTRSGSPRSYTTCTFPSWDTATCRSCKTRGCSCCRCPRYSWS 860
           S +ST       ++   + T + S  S TT T P+  T+T  +  T   +    P  + +
Sbjct: 69  STTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTAT--PTTTTT 126

Query: 861 TWPPCWPAGTS 893
           T PPC P   S
Sbjct: 127 TMPPCNPNAVS 137


>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 468 SSANPKHIDDKNNQMLSNTKNAGSSLANCD 379
           S+  P    D+N    SN++N+ + LA CD
Sbjct: 736 SNVTPTSGGDQNQNQQSNSRNSSAELAGCD 765


>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 468 SSANPKHIDDKNNQMLSNTKNAGSSLANCD 379
           S+  P    D+N    SN++N+ + LA CD
Sbjct: 736 SNVTPTSGGDQNQNQQSNSRNSSAELAGCD 765


>AL031633-19|CAA21031.1|  710|Caenorhabditis elegans Hypothetical
           protein Y39A1A.22 protein.
          Length = 710

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +2

Query: 617 YAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYMYIS 781
           YA  +HI  F PPL+L+    I+L N I           ++ FWL    Y  + S
Sbjct: 328 YAHMLHIPPFAPPLALMVVCLILLLNPIAKPDSVFH--RNSRFWLLKHCYKCFTS 380


>AF125952-3|AAD14699.1|  475|Caenorhabditis elegans Hypothetical
           protein C01B4.7 protein.
          Length = 475

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
 Frame = +2

Query: 635 INAFFPPLSLLHCFQIVLFNSILSQAGFVSCL----VSNTFWLASIIYYMYISFLG---- 790
           +  FF PL++ + F +V+F  +L   G    L    V  ++W     Y  Y++ L     
Sbjct: 130 LGTFFTPLAVTYSFYLVVFCRVLQGIGISVILTVLGVIPSYWSPKTEYSTYLAILSCAWQ 189

Query: 791 YSNLPFL 811
           +SN+ F+
Sbjct: 190 FSNVIFM 196


>AC006722-9|ABP57813.1|  475|Caenorhabditis elegans Hypothetical
           protein Y19D10A.4 protein.
          Length = 475

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
 Frame = +2

Query: 635 INAFFPPLSLLHCFQIVLFNSILSQAGFVSCL----VSNTFWLASIIYYMYISFLG---- 790
           +  FF PL++ + F +V+F  +L   G    L    V  ++W     Y  Y++ L     
Sbjct: 130 LGTFFTPLAVTYSFYLVVFCRVLQGIGISVILTVLGVIPSYWSPKTEYSTYLAILSCAWQ 189

Query: 791 YSNLPFL 811
           +SN+ F+
Sbjct: 190 FSNVIFM 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,266,451
Number of Sequences: 27780
Number of extensions: 419092
Number of successful extensions: 1665
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1663
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)