Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_E02
(356 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86; Eukary... 141 4e-33
UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42; Eutele... 113 1e-24
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 92 2e-18
UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7; Dikar... 91 5e-18
UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1; ... 71 4e-12
UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor; ... 69 2e-11
UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4; Apicomp... 67 1e-10
UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8; Trypano... 65 4e-10
UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato... 60 1e-08
UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba h... 57 8e-08
UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S riboso... 53 1e-06
UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148, w... 48 6e-05
UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4; Pyroba... 39 0.022
UniRef50_Q1YII8 Cluster: Possible regulatory protein; n=1; Auran... 33 1.5
UniRef50_Q1D826 Cluster: Patatin-like phospholipase family prote... 33 1.5
UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropy... 33 1.5
UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1; Hypert... 32 2.5
UniRef50_A1RYY6 Cluster: Small subunit ribosomal protein S25e; n... 32 2.5
UniRef50_P13185 Cluster: Protein kinase KIN1; n=2; Saccharomyces... 32 2.5
UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S riboso... 32 3.4
UniRef50_Q3XXC9 Cluster: Regulatory protein, GntR:Bacterial regu... 31 4.4
UniRef50_Q7XWC1 Cluster: OSJNBb0069N01.5 protein; n=1; Oryza sat... 31 4.4
UniRef50_Q5ZQV9 Cluster: Putative uncharacterized protein; n=3; ... 31 5.9
UniRef50_Q6UUT1 Cluster: Putative paramyosin; n=2; Oryza sativa ... 31 7.7
UniRef50_Q6MWI4 Cluster: B1159F04.16 protein; n=3; Oryza sativa|... 31 7.7
>UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86;
Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 117
Score = 141 bits (341), Expect = 4e-33
Identities = 67/75 (89%), Positives = 71/75 (94%)
Frame = +2
Query: 2 KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQ 181
KLNNQVLFDK TYE LYKEVP YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQ
Sbjct: 42 KLNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQ 101
Query: 182 HHGQVIYTRATKGDD 226
HH QVIYTRATKGD+
Sbjct: 102 HHSQVIYTRATKGDE 116
>UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42;
Euteleostomi|Rep: 40S ribosomal protein S25 - Homo
sapiens (Human)
Length = 125
Score = 113 bits (271), Expect = 1e-24
Identities = 58/78 (74%), Positives = 61/78 (78%)
Frame = +2
Query: 2 KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQ 181
KLNN VLFDK TY+ L KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +
Sbjct: 43 KLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSK 102
Query: 182 HHGQVIYTRATKGDDPVA 235
H QVIYTR TKG D A
Sbjct: 103 HRAQVIYTRNTKGGDAPA 120
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 92.3 bits (219), Expect = 2e-18
Identities = 43/71 (60%), Positives = 55/71 (77%)
Frame = +2
Query: 2 KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQ 181
K+NN VLFD+ TY+ L EVP+YK ITP+V+SERL++ GSLARRA+ +L +GLI+ V
Sbjct: 162 KVNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRGLIRMVSV 221
Query: 182 HHGQVIYTRAT 214
H Q IYTRAT
Sbjct: 222 HSSQQIYTRAT 232
>UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 107
Score = 91.1 bits (216), Expect = 5e-18
Identities = 41/71 (57%), Positives = 55/71 (77%)
Frame = +2
Query: 2 KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQ 181
K NN V+ DK Y+ + KEVP YKLI+ +V+ +R+K+ GSLARRA+ L ++GLIK+VV
Sbjct: 35 KANNAVIVDKAVYDRIIKEVPTYKLISQSVLIDRMKINGSLARRAIAFLEKEGLIKRVVH 94
Query: 182 HHGQVIYTRAT 214
HH Q+IYTRAT
Sbjct: 95 HHAQLIYTRAT 105
>UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1;
Babesia bovis|Rep: Ribosomal protein S25 , putative -
Babesia bovis
Length = 104
Score = 71.3 bits (167), Expect = 4e-12
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +2
Query: 2 KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVV- 178
K N+ V FDK TY+ L ++P+ +LIT + + ++LKV S+AR+AL L E+ LIK V
Sbjct: 34 KANHAVFFDKATYDKLMSDIPKARLITISTIVDKLKVNASMARKALAHLEEQKLIKPVCD 93
Query: 179 QHHGQVIYTRA 211
QHH Q +YT+A
Sbjct: 94 QHHAQRLYTKA 104
>UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor;
n=24; Eukaryota|Rep: 40S ribosomal protein S25-A
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 108
Score = 69.3 bits (162), Expect = 2e-11
Identities = 31/74 (41%), Positives = 50/74 (67%)
Frame = +2
Query: 2 KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQ 181
+ + V+ D+ Y+ + KEVP Y+ ++ +V+ +RLK+ GSLAR AL L ++G+IK + +
Sbjct: 35 RAQHAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPISK 94
Query: 182 HHGQVIYTRATKGD 223
H Q IYTRAT +
Sbjct: 95 HSKQAIYTRATASE 108
>UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4;
Apicomplexa|Rep: 40S ribosomal protein S25 -
Cryptosporidium parvum Iowa II
Length = 106
Score = 66.9 bits (156), Expect = 1e-10
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +2
Query: 2 KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV-V 178
K N+ VLFDK T + + +V + +L+TPAVV +LKV S AR L + KG+IK V
Sbjct: 36 KANHSVLFDKKTADRFHSDVLKSRLLTPAVVVNQLKVNASAARAMLRDCESKGIIKPVGE 95
Query: 179 QHHGQVIYTRA 211
Q HGQ+IYT+A
Sbjct: 96 QTHGQMIYTKA 106
>UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8;
Trypanosomatidae|Rep: 40S ribosomal protein S25 -
Leishmania infantum
Length = 120
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = +2
Query: 5 LNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 184
L N V+FDK TY+ L EVP+YKLITP+++S+RLK+ S+A L +L + LI+ V
Sbjct: 36 LQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQLCREKLIRLVSCS 95
Query: 185 HGQVIYTR 208
+YTR
Sbjct: 96 SKTRVYTR 103
>UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato
sp|P46301|RS25_LYCES 40S ribosomal protein S25 p; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S25,
cytosolic-tomato sp|P46301|RS25_LYCES 40S ribosomal
protein S25 p - Ostreococcus tauri
Length = 82
Score = 60.1 bits (139), Expect = 1e-08
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = +2
Query: 35 TYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYT 205
TY+ L EVP+YK+IT AV+ +RL++ SLAR+ + L+ KGLIK +V H +YT
Sbjct: 20 TYDKLLAEVPKYKMITTAVLCDRLRITCSLARKGIAILQAKGLIKPLVSHAALNVYT 76
>UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba
histolytica|Rep: Ribosomal protein S25 - Entamoeba
histolytica
Length = 129
Score = 57.2 bits (132), Expect = 8e-08
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +2
Query: 2 KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV-V 178
KLNN V+FDK T + K+VP K+ITP VV++R+ + G+L + L L +K LI V V
Sbjct: 38 KLNNTVIFDKATLDKCAKDVPSMKVITPPVVADRITITGALGKILLKALDKKELIVPVKV 97
Query: 179 QHHGQVIYTRATK 217
+H +V ++R+ K
Sbjct: 98 DYHIRV-FSRSDK 109
>UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=4; Euarchontoglires|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Homo sapiens
Length = 102
Score = 53.2 bits (122), Expect = 1e-06
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +2
Query: 101 RLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDD 226
RL++RGSLAR AL EL KGLIK V +H +VIYTR TK D
Sbjct: 53 RLEIRGSLARAALQELLGKGLIKLVSKHRARVIYTRNTKSGD 94
>UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_148,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 204
Score = 47.6 bits (108), Expect = 6e-05
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +2
Query: 2 KLNNQVLFDKPTYEXLYKEVPQY-KLITPAVVSERLKVRGSLARRALIELREKGLIKQV- 175
KLNN V D +Y+ + ++P+ LIT + VS++ KV GSLARR + + GL+
Sbjct: 102 KLNNAVFLDNTSYKQIETQLPKMGALITVSTVSDKFKVNGSLARRCIRHFAKSGLLVPAG 161
Query: 176 VQHHGQVIYT 205
Q+ Q I+T
Sbjct: 162 DQNSKQYIFT 171
>UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S25e -
Pyrobaculum aerophilum
Length = 110
Score = 39.1 bits (87), Expect = 0.022
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +2
Query: 14 QVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQ 193
QVL D+ ++ + KEV ++ITP ++ + ++ S+A + L L+E+G + V + H
Sbjct: 43 QVL-DEKVFQAIAKEVQNMRVITPYEIASKYGIKMSVAFKVLRNLKERGDLVLVAKGHRT 101
Query: 194 VIYTRATK 217
IY A +
Sbjct: 102 EIYVPAKR 109
>UniRef50_Q1YII8 Cluster: Possible regulatory protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Possible regulatory
protein - Aurantimonas sp. SI85-9A1
Length = 344
Score = 33.1 bits (72), Expect = 1.5
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 59 VPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV 175
+P +T ++++ERL + + RRAL EL ++GL+K+V
Sbjct: 41 LPALGHLTESLLAERLGISRAPVRRALSELEQQGLVKRV 79
>UniRef50_Q1D826 Cluster: Patatin-like phospholipase family protein;
n=1; Myxococcus xanthus DK 1622|Rep: Patatin-like
phospholipase family protein - Myxococcus xanthus
(strain DK 1622)
Length = 481
Score = 33.1 bits (72), Expect = 1.5
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +2
Query: 26 DKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVV 178
D P+ L KE ++++ P E VR SLA AL++LRE+ +++ V+
Sbjct: 5 DGPSKHVLLKE--RFQITRPLEEMELRLVRASLANAALVDLREEAILRTVL 53
>UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S25e - Aeropyrum
pernix
Length = 103
Score = 33.1 bits (72), Expect = 1.5
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 41 EXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIY 202
E KEV + + +TP +++++ V+ S+ARR L L E+G++ ++ +Y
Sbjct: 36 EQARKEVARERWVTPHKLAQKMGVKVSIARRVLRILEEEGVLVLFTRNRRSPLY 89
>UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1;
Hyperthermus butylicus DSM 5456|Rep: 30S ribosomal
protein S25e - Hyperthermus butylicus (strain DSM 5456 /
JCM 9403)
Length = 76
Score = 32.3 bits (70), Expect = 2.5
Identities = 13/44 (29%), Positives = 29/44 (65%)
Frame = +2
Query: 38 YEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 169
Y+ + +EV + +TP +++E+ + SLAR+ L L ++G+++
Sbjct: 18 YKRIAREVKRESFVTPYMLAEKYNMTISLARQVLKRLAKEGIVE 61
>UniRef50_A1RYY6 Cluster: Small subunit ribosomal protein S25e; n=1;
Thermofilum pendens Hrk 5|Rep: Small subunit ribosomal
protein S25e - Thermofilum pendens (strain Hrk 5)
Length = 112
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 41 EXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATK 217
E + KE+ K +TP V++ + ++ S A++ L EL +G++ ++ IY K
Sbjct: 48 EHVIKEIRGLKYVTPYVLASKFSLKLSRAKKVLRELESRGVVVAYDKNSRVPIYVPVAK 106
>UniRef50_P13185 Cluster: Protein kinase KIN1; n=2; Saccharomyces
cerevisiae|Rep: Protein kinase KIN1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 1064
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +2
Query: 14 QVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQ 193
+V FD L++++ Q K+ P +S ++V L++ +++ + + +KQVV+HH
Sbjct: 341 KVPFDDENSSVLHEKIKQGKVEYPQHLS--IEVISLLSKMLVVDPKRRATLKQVVEHHWM 398
Query: 194 V 196
V
Sbjct: 399 V 399
>UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Rattus norvegicus
Length = 93
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 143 ELREKGLIKQVVQHHGQVIYTRATKGDDPVA 235
EL +GL K V +H QV+ TR TKG D A
Sbjct: 58 ELLSEGLSKLVSKHRAQVVDTRNTKGGDAPA 88
>UniRef50_Q3XXC9 Cluster: Regulatory protein, GntR:Bacterial
regulatory protein, GntR; n=2; Enterococcus faecium
DO|Rep: Regulatory protein, GntR:Bacterial regulatory
protein, GntR - Enterococcus faecium DO
Length = 228
Score = 31.5 bits (68), Expect = 4.4
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 5 LNN--QVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVV 178
+NN Q ++ + +Y E+ I+ V+ E+L + + R ALI+LR + L+K +
Sbjct: 3 INNLQQQAYESIRKQIIYSELAPGSKISDKVLEEQLAIGRTPIREALIQLRNQELVKTIP 62
Query: 179 Q 181
Q
Sbjct: 63 Q 63
>UniRef50_Q7XWC1 Cluster: OSJNBb0069N01.5 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: OSJNBb0069N01.5 protein -
Oryza sativa subsp. japonica (Rice)
Length = 458
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/64 (25%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +2
Query: 38 YEXLYKEVP--QYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRA 211
+E ++ ++P Q ++I+PAV + + + AR+ +++ RE+ ++ +Q + Q I
Sbjct: 314 FEEIHDQIPDDQARIISPAVYLDHHRFKLEKARQRIVDRRERKELEATIQANRQTINKDK 373
Query: 212 TKGD 223
+K D
Sbjct: 374 SKLD 377
>UniRef50_Q5ZQV9 Cluster: Putative uncharacterized protein; n=3;
Siphoviridae|Rep: Putative uncharacterized protein -
Pseudomonas phage B3
Length = 736
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 111 TFNLSDTTAGVISLYCGTSLYSXSYVGLSNNTWLFNL 1
+ +L T +S+Y GTSL SY GL+ TW + L
Sbjct: 650 SISLEAGTTYTLSIYSGTSL-KKSYTGLTGTTWTYPL 685
>UniRef50_Q6UUT1 Cluster: Putative paramyosin; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Putative paramyosin -
Oryza sativa subsp. japonica (Rice)
Length = 773
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +2
Query: 38 YEXLYKEVP--QYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVI 199
+E ++ ++P Q K+I+PAV E + + AR+ + + RE+ ++ +Q + Q I
Sbjct: 580 FEEIHDQIPEDQAKIISPAVYLELHRFKLEKARQRIADRRERKELEATIQANRQTI 635
>UniRef50_Q6MWI4 Cluster: B1159F04.16 protein; n=3; Oryza
sativa|Rep: B1159F04.16 protein - Oryza sativa (Rice)
Length = 875
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +2
Query: 74 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 223
++TPA+ E+ +++ AR+ L + REK I+ +Q + Q+++ K D
Sbjct: 755 VLTPAIYLEQHQLKLEKARQRLADRREKKDIEATIQANRQLVHAEKIKLD 804
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 259,638,955
Number of Sequences: 1657284
Number of extensions: 4346625
Number of successful extensions: 11282
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 11096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11280
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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