Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_E02
         (356 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071076-1|AAL48698.1|  117|Drosophila melanogaster RE14595p pro...   141   3e-34
AE014297-1258|AAF54605.2|  117|Drosophila melanogaster CG6684-PB...   141   3e-34
AE014297-1257|AAN13495.1|  117|Drosophila melanogaster CG6684-PA...   141   3e-34
U03289-1|AAA03464.1|  113|Drosophila melanogaster protein ( Dros...   138   1e-33
AY071361-1|AAL48983.1|  521|Drosophila melanogaster RE39556p pro...    27   5.3  
AE014297-1601|AAF54879.2|  521|Drosophila melanogaster CG7091-PA...    27   5.3  

>AY071076-1|AAL48698.1|  117|Drosophila melanogaster RE14595p
           protein.
          Length = 117

 Score =  141 bits (341), Expect = 3e-34
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = +2

Query: 2   KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQ 181
           KLNNQVLFDK TYE LYKEVP YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQ
Sbjct: 42  KLNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQ 101

Query: 182 HHGQVIYTRATKGDD 226
           HH QVIYTRATKGD+
Sbjct: 102 HHSQVIYTRATKGDE 116


>AE014297-1258|AAF54605.2|  117|Drosophila melanogaster CG6684-PB,
           isoform B protein.
          Length = 117

 Score =  141 bits (341), Expect = 3e-34
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = +2

Query: 2   KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQ 181
           KLNNQVLFDK TYE LYKEVP YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQ
Sbjct: 42  KLNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQ 101

Query: 182 HHGQVIYTRATKGDD 226
           HH QVIYTRATKGD+
Sbjct: 102 HHSQVIYTRATKGDE 116


>AE014297-1257|AAN13495.1|  117|Drosophila melanogaster CG6684-PA,
           isoform A protein.
          Length = 117

 Score =  141 bits (341), Expect = 3e-34
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = +2

Query: 2   KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQ 181
           KLNNQVLFDK TYE LYKEVP YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQ
Sbjct: 42  KLNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQ 101

Query: 182 HHGQVIYTRATKGDD 226
           HH QVIYTRATKGD+
Sbjct: 102 HHSQVIYTRATKGDE 116


>U03289-1|AAA03464.1|  113|Drosophila melanogaster protein (
           Drosophila melanogasterSevelin ribosomal protein homolog
           gene, partial cds. ).
          Length = 113

 Score =  138 bits (335), Expect = 1e-33
 Identities = 66/75 (88%), Positives = 70/75 (93%)
 Frame = +2

Query: 2   KLNNQVLFDKPTYEXLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQ 181
           KLNNQVLFDK TYE LYKEVP YKLITP+VVSERLK+RGSL +RALIELREKGLIKQVVQ
Sbjct: 38  KLNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLDKRALIELREKGLIKQVVQ 97

Query: 182 HHGQVIYTRATKGDD 226
           HH QVIYTRATKGD+
Sbjct: 98  HHSQVIYTRATKGDE 112


>AY071361-1|AAL48983.1|  521|Drosophila melanogaster RE39556p
           protein.
          Length = 521

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 183 CWTTCLMRPFSLSSMSALLAR 121
           CW  CL+  +++SSMS  L R
Sbjct: 2   CWRLCLLHRYAMSSMSWTLPR 22


>AE014297-1601|AAF54879.2|  521|Drosophila melanogaster CG7091-PA
           protein.
          Length = 521

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 183 CWTTCLMRPFSLSSMSALLAR 121
           CW  CL+  +++SSMS  L R
Sbjct: 2   CWRLCLLHRYAMSSMSWTLPR 22


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,728,132
Number of Sequences: 53049
Number of extensions: 201268
Number of successful extensions: 466
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)