Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_E01
(680 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 27 0.19
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 23 1.8
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 23 1.8
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 22 4.0
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 22 4.0
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 9.3
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 21 9.3
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 26.6 bits (56), Expect = 0.19
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -1
Query: 284 NLASSEVFKPLSS--SGSLKNFPAVNLNFPNAXPGCSLYTQLLXHEAXGNCAXKKTAQXX 111
N + +V P SS SGSL FPA + P P ++Y+ LL + + + +
Sbjct: 55 NFSFGQVNSPPSSTSSGSLGQFPATPVIDPAKDP--AIYSNLLPRPGSNDNSWESLIEVT 112
Query: 110 EXN-ASKLTTTKDNSLH 63
+ + SKL DN H
Sbjct: 113 KTSETSKLQQLVDNIEH 129
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 307 KPFSNEGKPLVVQFTVKHEQDID 375
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 307 KPFSNEGKPLVVQFTVKHEQDID 375
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 307 KPFSNEGKPLVVQFTVKHEQDID 375
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 307 KPFSNEGKPLVVQFTVKHEQDID 375
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 307 KPFSNEGKPLVVQFTVKHEQDID 375
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 199 FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 300
FGK T FFSD + D + D Y L R
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISD-NLYILCR 235
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 199 FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 300
FGK T FFSD + D + D Y L R
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISD-NLYILCR 235
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 22.2 bits (45), Expect = 4.0
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -3
Query: 408 AVKDLKVSASTVNVLFMFDSELDDQGFTLITERFELTGESIEPRIFRGFQTFVILWVAEE 229
AV L + + F + L D RF S R+F TF+I+ V E
Sbjct: 266 AVYSLDLELKHIENFNDFVTALKDNVPVFAAARFYAINRSTIFRMFNAIVTFLIVMVQFE 325
Query: 228 LSSSQ 214
+ SQ
Sbjct: 326 TNYSQ 330
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 22.2 bits (45), Expect = 4.0
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -3
Query: 408 AVKDLKVSASTVNVLFMFDSELDDQGFTLITERFELTGESIEPRIFRGFQTFVILWVAEE 229
AV L + + F + L D RF S R+F TF+I+ V E
Sbjct: 586 AVYSLDLELKHIENFNDFVTALKDNVPVFAAARFYAINRSTIFRMFNAIVTFLIVMVQFE 645
Query: 228 LSSSQ 214
+ SQ
Sbjct: 646 TNYSQ 650
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 9.3
Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +3
Query: 51 CASXMQAVVLGR-CQL 95
CA+ Q+VVLGR C L
Sbjct: 566 CATKAQSVVLGRICTL 581
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 389 YPPPQSMSCSCLTVNWTTKGLP 324
YPPP S+ ++V T G P
Sbjct: 213 YPPPGSLGSMGVSVPCGTSGNP 234
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,988
Number of Sequences: 336
Number of extensions: 3760
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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