Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_D22
         (825 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22180-1|CAA80176.2|  371|Caenorhabditis elegans Hypothetical pr...   251   4e-67
Z22180-2|CAD54146.1|  392|Caenorhabditis elegans Hypothetical pr...   242   2e-64
Z22180-10|CAO82052.1|  360|Caenorhabditis elegans Hypothetical p...   241   6e-64
Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical pr...   196   2e-50
Z22180-9|CAO82051.1|  304|Caenorhabditis elegans Hypothetical pr...   103   1e-22

>Z22180-1|CAA80176.2|  371|Caenorhabditis elegans Hypothetical
           protein K11H3.1a protein.
          Length = 371

 Score =  251 bits (615), Expect = 4e-67
 Identities = 124/231 (53%), Positives = 157/231 (67%), Gaps = 2/231 (0%)
 Frame = +3

Query: 111 MAXKQPKXKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIIN 287
           +A   PK KV I+GSGNWGSAIA+IVG    S  + F+  V MWV+EEI+ G+KL+E+IN
Sbjct: 18  IATMSPK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVIN 76

Query: 288 ETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAA 467
             HEN+KYLPG  LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC  L+GKI     A
Sbjct: 77  NRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQA 136

Query: 468 LSLIKGFDIAEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETTIGC-RDVML 644
           +SLIKG    + GG+ LIS  I   LKI  +VLMGAN+A EVA + FCE TIGC R    
Sbjct: 137 ISLIKGVSTEKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAED 196

Query: 645 APLMRDIIQTDYFRXXXXXXXXAXXICGALKNIVAVGAGFVDGLGYGDTQR 797
            PL++ +  TD FR           +CGALKN+VA  AGF DGLGYGD  +
Sbjct: 197 GPLLKKLFHTDNFRINVVEDAHTVELCGALKNVVACAAGFTDGLGYGDNTK 247


>Z22180-2|CAD54146.1|  392|Caenorhabditis elegans Hypothetical
           protein K11H3.1b protein.
          Length = 392

 Score =  242 bits (592), Expect = 2e-64
 Identities = 126/240 (52%), Positives = 159/240 (66%), Gaps = 11/240 (4%)
 Frame = +3

Query: 111 MAXKQPKXKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIIN 287
           +A   PK KV I+GSGNWGSAIA+IVG    S  + F+  V MWV+EEI+ G+KL+E+IN
Sbjct: 30  IATMSPK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVIN 88

Query: 288 ETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAA 467
             HEN+KYLPG  LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC  L+GKI     A
Sbjct: 89  NRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQA 148

Query: 468 LSLIKG--FD-------IAEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETT 620
           +SLIKG  FD         + GG+ LIS  I   LKI  +VLMGAN+A EVA + FCE T
Sbjct: 149 ISLIKGISFDKTNQGVSTEKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEAT 208

Query: 621 IGC-RDVMLAPLMRDIIQTDYFRXXXXXXXXAXXICGALKNIVAVGAGFVDGLGYGDTQR 797
           IGC R     PL++ +  TD FR           +CGALKN+VA  AGF DGLGYGD  +
Sbjct: 209 IGCKRKAEDGPLLKKLFHTDNFRINVVEDAHTVELCGALKNVVACAAGFTDGLGYGDNTK 268


>Z22180-10|CAO82052.1|  360|Caenorhabditis elegans Hypothetical
           protein K11H3.1d protein.
          Length = 360

 Score =  241 bits (589), Expect = 6e-64
 Identities = 125/235 (53%), Positives = 157/235 (66%), Gaps = 11/235 (4%)
 Frame = +3

Query: 126 PKXKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHEN 302
           PK KV I+GSGNWGSAIA+IVG    S  + F+  V MWV+EEI+ G+KL+E+IN  HEN
Sbjct: 3   PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHEN 61

Query: 303 VKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIK 482
           +KYLPG  LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC  L+GKI     A+SLIK
Sbjct: 62  IKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIK 121

Query: 483 G--FD-------IAEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETTIGC-R 632
           G  FD         + GG+ LIS  I   LKI  +VLMGAN+A EVA + FCE TIGC R
Sbjct: 122 GISFDKTNQGVSTEKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKR 181

Query: 633 DVMLAPLMRDIIQTDYFRXXXXXXXXAXXICGALKNIVAVGAGFVDGLGYGDTQR 797
                PL++ +  TD FR           +CGALKN+VA  AGF DGLGYGD  +
Sbjct: 182 KAEDGPLLKKLFHTDNFRINVVEDAHTVELCGALKNVVACAAGFTDGLGYGDNTK 236


>Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical
           protein F47G4.3 protein.
          Length = 374

 Score =  196 bits (477), Expect = 2e-50
 Identities = 104/225 (46%), Positives = 136/225 (60%), Gaps = 7/225 (3%)
 Frame = +3

Query: 129 KXKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGK---KLTEIINETH 296
           + K+ IVG GNWGSAIA +VG+   +    F+  V++W  +    G     + E IN TH
Sbjct: 21  RKKIAIVGGGNWGSAIACVVGKTVKAQDEVFQPIVSIWCRDSRKPGDLSPSIAETINSTH 80

Query: 297 ENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSL 476
           EN KYLPG ++P NVVA   ++EA + A +LI VVPHQ +  IC  L GK++  A A+SL
Sbjct: 81  ENPKYLPGRRIPDNVVATSSLLEACQSAHILILVVPHQGIPQICDELRGKLQKGAHAISL 140

Query: 477 IKGFDIA-EGGGI--DLISHIITRCLKIPCAVLMGANIASEVAEEKFCETTIGCRDVMLA 647
            KG   + E G I   LIS  I R L + C+VLMGAN+A EVA+ KFCE TIGC+ +   
Sbjct: 141 TKGISSSCENGEIKMQLISEDIERALGVQCSVLMGANLAGEVADGKFCEATIGCKSLKNG 200

Query: 648 PLMRDIIQTDYFRXXXXXXXXAXXICGALKNIVAVGAGFVDGLGY 782
             ++ +  T  FR        A  +CGALKNIVA  AGF DGLG+
Sbjct: 201 EELKKVFDTPNFRIRVTTDYEAVELCGALKNIVACAAGFADGLGW 245


>Z22180-9|CAO82051.1|  304|Caenorhabditis elegans Hypothetical
           protein K11H3.1c protein.
          Length = 304

 Score =  103 bits (248), Expect = 1e-22
 Identities = 52/106 (49%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
 Frame = +3

Query: 483 GFDIAEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETTIGC-RDVMLAPLMR 659
           G    + GG+ LIS  I   LKI  +VLMGAN+A EVA + FCE TIGC R     PL++
Sbjct: 75  GVSTEKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLK 134

Query: 660 DIIQTDYFRXXXXXXXXAXXICGALKNIVAVGAGFVDGLGYGDTQR 797
            +  TD FR           +CGALKN+VA  AGF DGLGYGD  +
Sbjct: 135 KLFHTDNFRINVVEDAHTVELCGALKNVVACAAGFTDGLGYGDNTK 180



 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 45/73 (61%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = +3

Query: 126 PKXKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHEN 302
           PK KV I+GSGNWGSAIA+IVG    S  + F+  V MWV+EEI+ G+KL+E+IN  HEN
Sbjct: 3   PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHEN 61

Query: 303 VKYLPGHKLPSNV 341
           +KYLPG  LP+NV
Sbjct: 62  IKYLPGKVLPNNV 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,734,877
Number of Sequences: 27780
Number of extensions: 327091
Number of successful extensions: 1002
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)