Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_D19
         (880 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           24   5.3  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           24   5.3  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   7.0  

>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +1

Query: 463 DPDIRAAVPVTRATDLDTTNTGPVSTGTPRPT 558
           DP      P T      TT   P +T T  PT
Sbjct: 23  DPPTTTVAPATTTVAPTTTTVAPTTTTTVAPT 54


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +1

Query: 463 DPDIRAAVPVTRATDLDTTNTGPVSTGTPRPT 558
           DP      P T      TT   P +T T  PT
Sbjct: 23  DPPTTTVAPATTTVAPTTTTVAPTTTTTVAPT 54


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 534 NWTCIGCIQICSPGNRHCRS 475
           +W+CIGC  +    N  CRS
Sbjct: 61  HWSCIGCTNMLK--NPRCRS 78


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,948
Number of Sequences: 2352
Number of extensions: 9164
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)