Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_D19
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    31   1.1  
U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-li...    30   1.9  
AF039050-14|AAC47928.1|   69|Caenorhabditis elegans Neuropeptide...    30   1.9  
Z74473-5|CAI79195.1|  245|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -3

Query: 443 VP*KTTEASLITALISALVTTIVTSKTALITLTRITETGVAVT*TGISVTETRA 282
           +P  TT+  L+T+    + TT+  + TA I  T  T T    T  G++ T TRA
Sbjct: 206 MPMPTTQP-LVTSTAPEVTTTVAQTTTAPIVTTANTTTQGVTTTAGVTTTVTRA 258


>U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical
           protein F31D5.4 protein.
          Length = 989

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 5/98 (5%)
 Frame = +1

Query: 277 TAARVSVTEIPV*VTATPVS----VIRVKVIRAVLEVTMVVTKADIRAVIREASVVFQGT 444
           T AR + T IP   T T ++    V  +     V   T+  T          A+     T
Sbjct: 235 TTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTST 294

Query: 445 RAMEVTDPDIRA-AVPVTRATDLDTTNTGPVSTGTPRP 555
            +   T P        VT +T+  ++ T P ++ TP P
Sbjct: 295 ASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEP 332


>AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-like
           protein MTH-2 protein.
          Length = 971

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 5/98 (5%)
 Frame = +1

Query: 277 TAARVSVTEIPV*VTATPVS----VIRVKVIRAVLEVTMVVTKADIRAVIREASVVFQGT 444
           T AR + T IP   T T ++    V  +     V   T+  T          A+     T
Sbjct: 217 TTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTST 276

Query: 445 RAMEVTDPDIRA-AVPVTRATDLDTTNTGPVSTGTPRP 555
            +   T P        VT +T+  ++ T P ++ TP P
Sbjct: 277 ASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEP 314


>AF039050-14|AAC47928.1|   69|Caenorhabditis elegans
           Neuropeptide-like protein protein30 protein.
          Length = 69

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +3

Query: 489 GYPGYRSGYNQYRSSFDRYPATNAGNFFGGYGDG 590
           GY GY  GY  Y   +  Y     G  +GGYG G
Sbjct: 35  GYGGYGRGYGGYGRGYGGYGRGMWGRPYGGYGWG 68


>Z74473-5|CAI79195.1|  245|Caenorhabditis elegans Hypothetical
           protein F56H9.6 protein.
          Length = 245

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
 Frame = +1

Query: 394 ADIRAVIREASVVFQGTRAME----VTDPDIRAAVPVTRATDLDTTNTGPVSTGTPRPTL 561
           AD      EA+   + T   E     T+P      P T +T   TT T P +T T  PT 
Sbjct: 30  ADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTT 89

Query: 562 VIS 570
             S
Sbjct: 90  TTS 92


>Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical
           protein F01D5.1 protein.
          Length = 178

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -2

Query: 546 GTGRNWTCIGCIQICSPGNRHCRSDIRVCNLHSPGTLKDHRSL 418
           G  +N  C  C   CS   ++C    + C   +PGT KD  SL
Sbjct: 127 GWVKNGYCNKCFYKCSEREKYC---AKSCGFCTPGTCKDCNSL 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,951,517
Number of Sequences: 27780
Number of extensions: 210728
Number of successful extensions: 744
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)