Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_D18
         (810 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein lig...   179   4e-45
AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p pro...   179   4e-45
AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,...   179   4e-45
AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,...   179   4e-45
U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein lig...   178   8e-45
U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein lig...   178   8e-45
U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic dy...   178   8e-45
AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,...   178   8e-45
AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,...   178   8e-45
AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,...   178   8e-45
AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,...   178   8e-45
AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA...    69   8e-12

>U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  179 bits (436), Expect = 4e-45
 Identities = 82/86 (95%), Positives = 84/86 (97%)
 Frame = +3

Query: 114 RKAVIKHADMSEXXQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 293
           RKAVIK+ADMSE  QQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 63

Query: 294 SYVTHETRHFIYFYLGQVAILLFKSG 371
           SYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 64  SYVTHETRHFIYFYLGQVAILLFKSG 89


>AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p
           protein.
          Length = 89

 Score =  179 bits (436), Expect = 4e-45
 Identities = 82/86 (95%), Positives = 84/86 (97%)
 Frame = +3

Query: 114 RKAVIKHADMSEXXQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 293
           RKAVIK+ADMSE  QQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 63

Query: 294 SYVTHETRHFIYFYLGQVAILLFKSG 371
           SYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 64  SYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,
           isoform B protein.
          Length = 89

 Score =  179 bits (436), Expect = 4e-45
 Identities = 82/86 (95%), Positives = 84/86 (97%)
 Frame = +3

Query: 114 RKAVIKHADMSEXXQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 293
           RKAVIK+ADMSE  QQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 63

Query: 294 SYVTHETRHFIYFYLGQVAILLFKSG 371
           SYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 64  SYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,
           isoform A protein.
          Length = 89

 Score =  179 bits (436), Expect = 4e-45
 Identities = 82/86 (95%), Positives = 84/86 (97%)
 Frame = +3

Query: 114 RKAVIKHADMSEXXQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 293
           RKAVIK+ADMSE  QQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 63

Query: 294 SYVTHETRHFIYFYLGQVAILLFKSG 371
           SYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 64  SYVTHETRHFIYFYLGQVAILLFKSG 89


>U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  178 bits (433), Expect = 8e-45
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = +3

Query: 114 RKAVIKHADMSEXXQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 293
           RKAVIK+ADMSE  QQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 294 SYVTHETRHFIYFYLGQVAILLFKSG 371
           SYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 64  SYVTHETRHFIYFYLGQVAILLFKSG 89


>U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  178 bits (433), Expect = 8e-45
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = +3

Query: 114 RKAVIKHADMSEXXQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 293
           RKAVIK+ADMSE  QQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 294 SYVTHETRHFIYFYLGQVAILLFKSG 371
           SYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 64  SYVTHETRHFIYFYLGQVAILLFKSG 89


>U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic
           dynein light chain 1 protein.
          Length = 89

 Score =  178 bits (433), Expect = 8e-45
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = +3

Query: 114 RKAVIKHADMSEXXQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 293
           RKAVIK+ADMSE  QQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 294 SYVTHETRHFIYFYLGQVAILLFKSG 371
           SYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 64  SYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,
           isoform D protein.
          Length = 89

 Score =  178 bits (433), Expect = 8e-45
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = +3

Query: 114 RKAVIKHADMSEXXQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 293
           RKAVIK+ADMSE  QQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 294 SYVTHETRHFIYFYLGQVAILLFKSG 371
           SYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 64  SYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,
           isoform C protein.
          Length = 89

 Score =  178 bits (433), Expect = 8e-45
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = +3

Query: 114 RKAVIKHADMSEXXQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 293
           RKAVIK+ADMSE  QQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 294 SYVTHETRHFIYFYLGQVAILLFKSG 371
           SYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 64  SYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,
           isoform B protein.
          Length = 89

 Score =  178 bits (433), Expect = 8e-45
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = +3

Query: 114 RKAVIKHADMSEXXQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 293
           RKAVIK+ADMSE  QQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 294 SYVTHETRHFIYFYLGQVAILLFKSG 371
           SYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 64  SYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,
           isoform A protein.
          Length = 89

 Score =  178 bits (433), Expect = 8e-45
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = +3

Query: 114 RKAVIKHADMSEXXQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFG 293
           RKAVIK+ADMSE  QQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 294 SYVTHETRHFIYFYLGQVAILLFKSG 371
           SYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 64  SYVTHETRHFIYFYLGQVAILLFKSG 89


>AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA
           protein.
          Length = 104

 Score = 68.9 bits (161), Expect = 8e-12
 Identities = 32/83 (38%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
 Frame = +3

Query: 123 VIKHADMSEXXQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSY 299
           ++KH DM+E  + +A++ +  A EK++   + AA  IK+  DKK+   WH +VG  FG  
Sbjct: 20  LVKHTDMNEEMRIEAIELSITACEKYSSNYEHAAKIIKENMDKKFGIYWHVVVGEGFGFE 79

Query: 300 VTHETRHFIY-FYLGQVAILLFK 365
           V++ET + +Y F+ G +AI+L+K
Sbjct: 80  VSYETENILYLFFAGNLAIVLWK 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,134,032
Number of Sequences: 53049
Number of extensions: 620322
Number of successful extensions: 1217
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)