Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_D13
         (812 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    48   1e-07
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   6.7  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 47.6 bits (108), Expect = 1e-07
 Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 26/190 (13%)
 Frame = +3

Query: 267 KELDLNHGRIGKI--ENLEHLKKLERLYLRWNLIKKIEG--LEMLQSL--VELELYDNQI 428
           K L+L   +I  I  E  ++L +LE L L +N I  ++    + + SL    + +  N++
Sbjct: 143 KRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLDFNIFDQVGSLGMFHVNMSHNKL 202

Query: 429 VVI-----------ENLDSLVNLEILDLSFNRIKEITG---LEKLLNIKKLFLSSNKITE 566
           + +             L  L N+++LDLSFN I  +         L++ +L+L  NK+  
Sbjct: 203 INLVVAPSVPFEQDTGLGGLQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLN 262

Query: 567 IKN--VNHLPNLELLELGDNRIREI--KNLEGLRTLKQLYLGKNKISKIQN--LEDLTNL 728
                  ++P+L++L+L  N + E+        + L+ L    N+IS+I N     L NL
Sbjct: 263 ATKDLFGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNL 322

Query: 729 EILVLQANRL 758
            I+    NRL
Sbjct: 323 RIVDFSHNRL 332



 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 27/194 (13%)
 Frame = +3

Query: 261 ETKELDLNHGRIGKIEN--LEHLKKLERLYLRWNLIKKIEGLEMLQSLVELELYDNQIVV 434
           + +++ L+  RI  +E     +LK L+RL L+ N I  I   E  Q+L ELE  D     
Sbjct: 117 QLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATI-AYETFQNLPELEDLDLAYNS 175

Query: 435 IENLDSLVNLEI-------LDLSFNRI-----------KEITGLEKLLNIKKLFLSSNKI 560
           I +LD  +  ++       +++S N++           ++ TGL  L NIK L LS N I
Sbjct: 176 ISSLDFNIFDQVGSLGMFHVNMSHNKLINLVVAPSVPFEQDTGLGGLQNIKVLDLSFNNI 235

Query: 561 TEIKNVNHLP---NLELLELGDNR-IREIKNLEG-LRTLKQLYLGKNKISKI--QNLEDL 719
           T +      P   +L  L LG N+ +   K+L G +  L+ L L  N + ++      + 
Sbjct: 236 TSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTFRNT 295

Query: 720 TNLEILVLQANRLT 761
             L+ L    NR++
Sbjct: 296 KKLQWLDTSHNRIS 309


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 714 PQGFVFCLFYFYPNIIV 664
           P  F+ C++YFY   I+
Sbjct: 139 PLFFLLCIYYFYCAFII 155



 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 705 FVFCLFYFYPNIIV 664
           F+ C++YFY  +I+
Sbjct: 281 FLLCIYYFYCALII 294


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 415 YNSSSTSDCNISKPSIF 365
           YN+SS S+ N S  S+F
Sbjct: 47  YNTSSVSNFNESSSSVF 63


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 415 YNSSSTSDCNISKPSIF 365
           YN+SS S+ N S  S+F
Sbjct: 47  YNTSSVSNFNESSSSVF 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,598
Number of Sequences: 336
Number of extensions: 2691
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)