Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_D13
(812 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 56 3e-10
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 3.4
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 23 3.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 7.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 7.8
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 56.4 bits (130), Expect = 3e-10
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Frame = +3
Query: 525 NIKKLFLSSNKITEIKN--VNHLPNLELLELGDNRIREIK--NLEGLRTLKQLYLGKNKI 692
N++ L+++ + I I+N N L NL++L L DNRIRE+K E L L++LYL N I
Sbjct: 819 NMRVLYVNGSGIESIQNRTFNGLNNLQILHLEDNRIRELKGFEFERLSHLRELYLQNNLI 878
Query: 693 SKIQNLE--DLTNLEILVLQANRL 758
I NL L +LEIL L NRL
Sbjct: 879 GFIGNLTFLPLRSLEILRLSGNRL 902
Score = 50.0 bits (114), Expect = 3e-08
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Frame = +3
Query: 324 KKLERLYLRWNLIKKI-EGL-EMLQSLVELELYDNQI----VVIENLDSLVNLEILDLSF 485
+ L ++L +N ++ + +G+ L+ L+ L L N++ V L+ L +L+LS+
Sbjct: 285 RDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAGNRLGSDRVDETTFLGLIRLIVLNLSY 344
Query: 486 NRIKEITG--LEKLLNIKKLFLSSNKITEIKNVNHLP--NLELLELGDNRIREI--KNLE 647
N + I + L ++ L L +N I I++ LP NL LEL DN++R + +
Sbjct: 345 NMLTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLELSDNKLRTVGAQLFN 404
Query: 648 GLRTLKQLYLGKNKISKIQNL--EDLTNLEILVLQANRLT 761
GL L +L L N I+ I L + ++L+ L L N LT
Sbjct: 405 GLFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELT 444
Score = 48.8 bits (111), Expect = 6e-08
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Frame = +3
Query: 339 LYLRWNLIKKIEGLEMLQSLVELELYDNQ--IVVIEN--LDSLVNLEILDLSFNRIKEIT 506
+YL N++++++ + LY N I I+N + L NL+IL L NRI+E+
Sbjct: 799 VYLDGNVLRELQNHVFIGRKNMRVLYVNGSGIESIQNRTFNGLNNLQILHLEDNRIRELK 858
Query: 507 G--LEKLLNIKKLFLSSNKITEIKNVNHLP--NLELLELGDNRI 626
G E+L ++++L+L +N I I N+ LP +LE+L L NR+
Sbjct: 859 GFEFERLSHLRELYLQNNLIGFIGNLTFLPLRSLEILRLSGNRL 902
Score = 41.9 bits (94), Expect = 7e-06
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Frame = +3
Query: 273 LDLNHGRIGKIEN--LEHLKKLERLYLRWNLIKKIEGL-EMLQSLVELELYDNQIVVIEN 443
L+L ++ +E E +LE + L N + I G+ + SL+ L L +N I +
Sbjct: 507 LNLARNKVQHVERYAFERNMRLEAIRLDGNFLSDINGVFTSIASLLLLNLSENHIEWFDY 566
Query: 444 LDSLVNLEILDLSFNRIKEITGLEKLLN--IKKLFLSSNKITEIKNVNHLPNLELLELGD 617
NL+ LD+ N I+ + K+ + +K L S N+ITE+ ++ ++ELL + +
Sbjct: 567 AFIPGNLKWLDIHGNFIESLGNYYKIRDSKVKTLDASHNRITELSPLSVPDSVELLFINN 626
Query: 618 NRIREIK 638
N I ++
Sbjct: 627 NYINLVR 633
Score = 36.3 bits (80), Expect = 3e-04
Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Frame = +3
Query: 387 LQSLVELELYDN--QIVVIENLDSLVNLEILDLSFNRIKEITGLEKLLNIKKLFLSSNKI 560
L+ L LE+ ++ Q + + +L SL NL+ L+L+ NR+++I + LN + S+
Sbjct: 146 LRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENRLRDINDIG--LNRRDSDDGSDG- 202
Query: 561 TEIKNVNHLPNLELLELGDN---RIREIKNLEGLRTLKQLYLGKNKISKIQNLEDLTNLE 731
+ + ++ +L+L N R++E L LR L++L+L +N I +I + LT L
Sbjct: 203 NDGDESSCRADIRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAG-DALTGLT 261
Query: 732 IL 737
+L
Sbjct: 262 VL 263
Score = 30.3 bits (65), Expect = 0.022
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 273 LDLNHGRIGKIENLE--HLKKLERLYLRWNLIKKIEGLEM--LQSLVELELYDNQIVVIE 440
L L RI +++ E L L LYL+ NLI I L L+SL L L N++V
Sbjct: 847 LHLEDNRIRELKGFEFERLSHLRELYLQNNLIGFIGNLTFLPLRSLEILRLSGNRLVTFP 906
Query: 441 NLDSLVNLEILDLS 482
+N +++LS
Sbjct: 907 VWQVTLNARLVELS 920
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.0 bits (47), Expect = 3.4
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 351 WNLIKKIEGLEMLQSLVELELYDNQIVVIENLDSLVNLEILDLSFNRIKEITG 509
W IKK + M + ++YD++I + + VN L++ N I E+ G
Sbjct: 22 WEAIKKDAAVNMEGQFLVRQIYDDEI-TYNIISAAVNR--LNIPANEILELFG 71
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.0 bits (47), Expect = 3.4
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 351 WNLIKKIEGLEMLQSLVELELYDNQIVVIENLDSLVNLEILDLSFNRIKEITG 509
W IKK + M + ++YD++I + + VN L++ N I E+ G
Sbjct: 22 WEAIKKDAAVNMEGQFLVRQIYDDEI-TYNIISAAVNR--LNIPANEILELFG 71
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 324 LNVQDSRSCLYGRDLS 277
LNVQ + C+ G+D S
Sbjct: 469 LNVQRAAKCIIGKDYS 484
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 459 NLEILDLSFNRIKEITGLEK 518
N+ LDLS +++ ITG+ K
Sbjct: 814 NILFLDLSTGKVEMITGVGK 833
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,858
Number of Sequences: 438
Number of extensions: 3092
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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