Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_D09
         (356 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   3.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   8.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   8.7  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = -2

Query: 151 IHITLFLAILTRQCVYVKALVG 86
           +++TL++ +   Q  Y   L+G
Sbjct: 232 LYVTLYIILTNNQAKYCTTLIG 253


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 179 MCYISTNYIHTYNTIFSYIN 120
           + YI T Y    + IF YI+
Sbjct: 91  LSYIYTTYSRKLSGIFKYID 110


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 179 MCYISTNYIHTYNTIFSYIN 120
           + YI T Y    + IF YI+
Sbjct: 47  LSYIYTTYSRKLSGIFKYID 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,051
Number of Sequences: 336
Number of extensions: 572
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)